7AG7

Crystal structure of SFP aldolase YihT from Salmonella enterica in complex with sulfate bound at the active site

External Resource: Annotation

Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
A	SCOP2B Superfamily	Aldolase	8040333	3000445	SCOP2B (2022-06-29)
B	SCOP2B Superfamily	Aldolase	8040333	3000445	SCOP2B (2022-06-29)
C	SCOP2B Superfamily	Aldolase	8040333	3000445	SCOP2B (2022-06-29)
D	SCOP2B Superfamily	Aldolase	8040333	3000445	SCOP2B (2022-06-29)
E	SCOP2B Superfamily	Aldolase	8040333	3000445	SCOP2B (2022-06-29)
F	SCOP2B Superfamily	Aldolase	8040333	3000445	SCOP2B (2022-06-29)
G	SCOP2B Superfamily	Aldolase	8040333	3000445	SCOP2B (2022-06-29)
H	SCOP2B Superfamily	Aldolase	8040333	3000445	SCOP2B (2022-06-29)
I	SCOP2B Superfamily	Aldolase	8040333	3000445	SCOP2B (2022-06-29)
J	SCOP2B Superfamily	Aldolase	8040333	3000445	SCOP2B (2022-06-29)
K	SCOP2B Superfamily	Aldolase	8040333	3000445	SCOP2B (2022-06-29)
L	SCOP2B Superfamily	Aldolase	8040333	3000445	SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
A	DeoC	e7ag7A1	A: a/b barrels	X: TIM beta/alpha-barrel	H: TIM barrels (From Topology)	T: TIM barrels	F: DeoC	ECOD (1.6)
B	DeoC	e7ag7B1	A: a/b barrels	X: TIM beta/alpha-barrel	H: TIM barrels (From Topology)	T: TIM barrels	F: DeoC	ECOD (1.6)
C	DeoC	e7ag7C1	A: a/b barrels	X: TIM beta/alpha-barrel	H: TIM barrels (From Topology)	T: TIM barrels	F: DeoC	ECOD (1.6)
D	DeoC	e7ag7D1	A: a/b barrels	X: TIM beta/alpha-barrel	H: TIM barrels (From Topology)	T: TIM barrels	F: DeoC	ECOD (1.6)
E	DeoC	e7ag7E1	A: a/b barrels	X: TIM beta/alpha-barrel	H: TIM barrels (From Topology)	T: TIM barrels	F: DeoC	ECOD (1.6)
F	DeoC	e7ag7F1	A: a/b barrels	X: TIM beta/alpha-barrel	H: TIM barrels (From Topology)	T: TIM barrels	F: DeoC	ECOD (1.6)
G	DeoC	e7ag7G1	A: a/b barrels	X: TIM beta/alpha-barrel	H: TIM barrels (From Topology)	T: TIM barrels	F: DeoC	ECOD (1.6)
H	DeoC	e7ag7H1	A: a/b barrels	X: TIM beta/alpha-barrel	H: TIM barrels (From Topology)	T: TIM barrels	F: DeoC	ECOD (1.6)
I	DeoC	e7ag7I1	A: a/b barrels	X: TIM beta/alpha-barrel	H: TIM barrels (From Topology)	T: TIM barrels	F: DeoC	ECOD (1.6)
J	DeoC	e7ag7J1	A: a/b barrels	X: TIM beta/alpha-barrel	H: TIM barrels (From Topology)	T: TIM barrels	F: DeoC	ECOD (1.6)
K	DeoC	e7ag7K1	A: a/b barrels	X: TIM beta/alpha-barrel	H: TIM barrels (From Topology)	T: TIM barrels	F: DeoC	ECOD (1.6)
L	DeoC	e7ag7L1	A: a/b barrels	X: TIM beta/alpha-barrel	H: TIM barrels (From Topology)	T: TIM barrels	F: DeoC	ECOD (1.6)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A, B, C, D, E A, B, C, D, E, F, G, H, I, J, K, L	PF01791	DeoC/LacD family aldolase (DeoC)	DeoC/LacD family aldolase	This family includes diverse aldolase enzymes. This family includes the enzyme deoxyribose-phosphate aldolase EC:4.1.2.4, which is involved in nucleotide metabolism. The family also includes a group of related bacterial proteins of unknown function, ...	This family includes diverse aldolase enzymes. This family includes the enzyme deoxyribose-phosphate aldolase EC:4.1.2.4, which is involved in nucleotide metabolism. The family also includes a group of related bacterial proteins of unknown function, see examples Swiss:Q57843 and Swiss:P76143. The family also includes tagatose 1,6-diphosphate aldolase (EC:4.1.2.40) is part of the tagatose-6-phosphate pathway of galactose-6-phosphate degradation [2].	Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B, C, D, E A, B, C, D, E, F, G, H, I, J, K, L	Sulfofructosephosphate aldolase	6-deoxy-6-sulfofructose-1-phosphate aldolase activity lyase activity catalytic activity carbon-carbon lyase activity aldehyde-lyase activity	carbohydrate derivative catabolic process catabolic process carbohydrate derivative metabolic process 6-sulfoquinovose(1-) catabolic process organic acid catabolic process organic acid metabolic process cellular catabolic process sulfur compound catabolic process 6-sulfoquinovose(1-) metabolic process sulfur compound metabolic process metabolic process cellular process small molecule metabolic process small molecule catabolic process	-

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B, C, D, E A, B, C, D, E, F, G, H, I, J, K, L	IPR050552	LacD aldolase	Family
A, B, C, D, E A, B, C, D, E, F, G, H, I, J, K, L	IPR002915	DeoC/FbaB/LacD aldolase	Family
A, B, C, D, E A, B, C, D, E, F, G, H, I, J, K, L	IPR017291	Sulfofructosephosphate aldolase, YihT	Family
A, B, C, D, E A, B, C, D, E, F, G, H, I, J, K, L	IPR013785	Aldolase-type TIM barrel	Homologous Superfamily

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.