7CGP
Cryo-EM structure of the human mitochondrial translocase TIM22 complex at 3.7 angstrom.
External Resource: Annotation
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
D | SCOP2B Superfamily | Tim10-like | 8038513 | 3000385 | SCOP2B (2022-06-29) |
K | SCOP2B Superfamily | Tim10-like | 8038513 | 3000385 | SCOP2B (2022-06-29) |
L | SCOP2B Superfamily | Tim10-like | 8038513 | 3000385 | SCOP2B (2022-06-29) |
E | SCOP2B Superfamily | Tim10-like | 8038513 | 3000385 | SCOP2B (2022-06-29) |
F | SCOP2B Superfamily | Tim10-like | 8038513 | 3000385 | SCOP2B (2022-06-29) |
G | SCOP2B Superfamily | Tim10-like | 8038514 | 3000385 | SCOP2B (2022-06-29) |
H | SCOP2B Superfamily | Tim10-like | 8038514 | 3000385 | SCOP2B (2022-06-29) |
I | SCOP2B Superfamily | Tim10-like | 8038514 | 3000385 | SCOP2B (2022-06-29) |
M | SCOP2B Superfamily | Tim10-like | 8038514 | 3000385 | SCOP2B (2022-06-29) |
N | SCOP2B Superfamily | Tim10-like | 8038514 | 3000385 | SCOP2B (2022-06-29) |
O | SCOP2B Superfamily | Tim10-like | 8038514 | 3000385 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
B | F_UNCLASSIFIED | e7cgpB1 | A: beta sandwiches | X: NAD kinase beta sandwich domain-like (From Topology) | H: NAD kinase beta sandwich domain-like (From Topology) | T: NAD kinase beta sandwich domain-like | F: F_UNCLASSIFIED | ECOD (1.6) |
B | DAGK_cat | e7cgpB2 | A: a/b three-layered sandwiches | X: Flavodoxin-like | H: Class I glutamine amidotransferase-like | T: Phosphofructokinase N-terminal domain | F: DAGK_cat | ECOD (1.6) |
D | zf-Tim10_DDP | e7cgpD1 | A: few secondary structure elements | X: Tim10/DDP (From Topology) | H: Tim10/DDP (From Topology) | T: Tim10/DDP | F: zf-Tim10_DDP | ECOD (1.6) |
K | zf-Tim10_DDP | e7cgpK1 | A: few secondary structure elements | X: Tim10/DDP (From Topology) | H: Tim10/DDP (From Topology) | T: Tim10/DDP | F: zf-Tim10_DDP | ECOD (1.6) |
L | zf-Tim10_DDP | e7cgpL1 | A: few secondary structure elements | X: Tim10/DDP (From Topology) | H: Tim10/DDP (From Topology) | T: Tim10/DDP | F: zf-Tim10_DDP | ECOD (1.6) |
E | zf-Tim10_DDP | e7cgpE1 | A: few secondary structure elements | X: Tim10/DDP (From Topology) | H: Tim10/DDP (From Topology) | T: Tim10/DDP | F: zf-Tim10_DDP | ECOD (1.6) |
F | zf-Tim10_DDP | e7cgpF1 | A: few secondary structure elements | X: Tim10/DDP (From Topology) | H: Tim10/DDP (From Topology) | T: Tim10/DDP | F: zf-Tim10_DDP | ECOD (1.6) |
G | zf-Tim10_DDP | e7cgpG1 | A: few secondary structure elements | X: Tim10/DDP (From Topology) | H: Tim10/DDP (From Topology) | T: Tim10/DDP | F: zf-Tim10_DDP | ECOD (1.6) |
H | zf-Tim10_DDP | e7cgpH1 | A: few secondary structure elements | X: Tim10/DDP (From Topology) | H: Tim10/DDP (From Topology) | T: Tim10/DDP | F: zf-Tim10_DDP | ECOD (1.6) |
I | zf-Tim10_DDP | e7cgpI1 | A: few secondary structure elements | X: Tim10/DDP (From Topology) | H: Tim10/DDP (From Topology) | T: Tim10/DDP | F: zf-Tim10_DDP | ECOD (1.6) |
M | zf-Tim10_DDP | e7cgpM1 | A: few secondary structure elements | X: Tim10/DDP (From Topology) | H: Tim10/DDP (From Topology) | T: Tim10/DDP | F: zf-Tim10_DDP | ECOD (1.6) |
N | zf-Tim10_DDP | e7cgpN1 | A: few secondary structure elements | X: Tim10/DDP (From Topology) | H: Tim10/DDP (From Topology) | T: Tim10/DDP | F: zf-Tim10_DDP | ECOD (1.6) |
O | zf-Tim10_DDP | e7cgpO1 | A: few secondary structure elements | X: Tim10/DDP (From Topology) | H: Tim10/DDP (From Topology) | T: Tim10/DDP | F: zf-Tim10_DDP | ECOD (1.6) |
J | zf-Tim10_DDP | e7cgpJ1 | A: few secondary structure elements | X: Tim10/DDP (From Topology) | H: Tim10/DDP (From Topology) | T: Tim10/DDP | F: zf-Tim10_DDP | ECOD (1.6) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF02466 | Tim17/Tim22/Tim23/Pmp24 family (Tim17) | Tim17/Tim22/Tim23/Pmp24 family | - | Family | |
PF19712 | Acylglycerol kinase C-terminal (AGK_C) | Acylglycerol kinase C-terminal | This domain corresponds to the C-terminal of mitochondrial Acylglycerol kinase (AGK, also known as MuLK) [1,2,3]. AGK is a metazoan-specific protein integrated into the mitochondrial inner membrane through a short N-terminal transmembrane domain. Thi ... | Domain | |
PF00781 | Diacylglycerol kinase catalytic domain (DAGK_cat) | Diacylglycerol kinase catalytic domain | - | Family | |
PF10171 | Translocase of the Inner Mitochondrial membrane 29 (Tim29) | Translocase of the Inner Mitochondrial membrane 29 | - | Family | |
PF02953 | Tim10/DDP family zinc finger (zf-Tim10_DDP) | Tim10/DDP family zinc finger | Putative zinc binding domain with four conserved cysteine residues. This domain is found in the human disease protein Swiss:O60220. Members of this family such as Tim9 and Tim10 are involved in mitochondrial protein import [1]. Members of thi ... | Domain | |
PF02953 | Tim10/DDP family zinc finger (zf-Tim10_DDP) | Tim10/DDP family zinc finger | Putative zinc binding domain with four conserved cysteine residues. This domain is found in the human disease protein Swiss:O60220. Members of this family such as Tim9 and Tim10 are involved in mitochondrial protein import [1]. Members of thi ... | Domain | |
PF02953 | Tim10/DDP family zinc finger (zf-Tim10_DDP) | Tim10/DDP family zinc finger | Putative zinc binding domain with four conserved cysteine residues. This domain is found in the human disease protein Swiss:O60220. Members of this family such as Tim9 and Tim10 are involved in mitochondrial protein import [1]. Members of thi ... | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR039175 | Mitochondrial import inner membrane translocase subunit TIM22 | Family | |
IPR045579 | Acylglycerol kinase, C-terminal | Domain | |
IPR017438 | Inorganic polyphosphate/ATP-NAD kinase, N-terminal | Homologous Superfamily | |
IPR001206 | Diacylglycerol kinase, catalytic domain | Domain | |
IPR050187 | Lipid Phosphate Formation and Regulation | Family | |
IPR016064 | NAD kinase/diacylglycerol kinase-like domain superfamily | Homologous Superfamily | |
IPR019322 | Mitochondrial import inner membrane translocase subunit Tim29 | Family | |
IPR035427 | Tim10-like domain superfamily | Homologous Superfamily | |
IPR004217 | Tim10-like | Domain | |
IPR050673 | Mitochondrial import inner membrane translocase subunit | Family | |
IPR035427 | Tim10-like domain superfamily | Homologous Superfamily | |
IPR004217 | Tim10-like | Domain | |
IPR004217 | Tim10-like | Domain | |
IPR050673 | Mitochondrial import inner membrane translocase subunit | Family | |
IPR035427 | Tim10-like domain superfamily | Homologous Superfamily |
Membrane Protein Annotation: OPM OPM Database Homepage
Chains | External Link | Type | Class | Superfamily | Family |
---|---|---|---|---|---|
OPM | Transmembrane | Alpha-helical polytopic | Mitochondrial and chloroplast protein translocases | TIM complex |