7DFV | pdb_00007dfv

Cryo-EM structure of plant NLR RPP1 tetramer core part

External Resource: Annotation

Domain Annotation: ECOD Classification
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
D [auth A]	SLBB	e7dfvA1	A: alpha bundles	X: RNase A-like	H: RNase A-like	T: RNase A-like	F: SLBB	ECOD (develop294)
C [auth D]	SLBB	e7dfvD1	A: alpha bundles	X: RNase A-like	H: RNase A-like	T: RNase A-like	F: SLBB	ECOD (develop294)
B [auth C]	SLBB	e7dfvC1	A: alpha bundles	X: RNase A-like	H: RNase A-like	T: RNase A-like	F: SLBB	ECOD (develop294)
A [auth B]	NB-ARC	e7dfvB1	A: alpha bundles	X: RNase A-like	H: RNase A-like	T: RNase A-like	F: NB-ARC	ECOD (develop294)
A [auth B]	SLBB	e7dfvB3	A: alpha bundles	X: RNase A-like	H: RNase A-like	T: RNase A-like	F: SLBB	ECOD (develop294)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A [auth B], B [auth C], C [auth D], D [auth A]	NAD+ hydrolase (NADase)	binding adenyl ribonucleotide binding nucleotide binding purine ribonucleotide binding purine ribonucleoside triphosphate binding nucleoside phosphate binding ion binding purine nucleotide binding anion binding adenyl nucleotide binding ATP binding heterocyclic compound binding carbohydrate derivative binding ribonucleotide binding binding adenyl ribonucleotide binding nucleotide binding purine ribonucleotide binding purine ribonucleoside triphosphate binding nucleoside phosphate binding ion binding purine nucleotide binding anion binding adenyl nucleotide binding ATP binding heterocyclic compound binding carbohydrate derivative binding ribonucleotide binding small molecule binding ADP binding hydrolase activity, acting on glycosyl bonds NAD+ nucleosidase activity, cyclic ADP-ribose generating hydrolase activity hydrolase activity, hydrolyzing N-glycosyl compounds catalytic activity	biological process involved in interspecies interaction between organisms response to stimulus response to other organism response to external stimulus response to external biotic stimulus response to biotic stimulus cellular response to stimulus regulation of biological process regulation of cellular process signaling biological regulation cellular process signal transduction cell communication biological process involved in interspecies interaction between organisms response to stimulus response to other organism response to external stimulus response to external biotic stimulus response to biotic stimulus cellular response to stimulus regulation of biological process regulation of cellular process signaling biological regulation cellular process signal transduction cell communication defense response response to stress	-

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A [auth B], B [auth C], C [auth D], D [auth A]	IPR000157	Toll/interleukin-1 receptor homology (TIR) domain	Domain
A [auth B], B [auth C], C [auth D], D [auth A]	IPR045344	C-JID domain	Domain
A [auth B], B [auth C], C [auth D], D [auth A]	IPR042197	Apoptotic protease-activating factors, helical domain	Homologous Superfamily
A [auth B], B [auth C], C [auth D], D [auth A]	IPR036390	Winged helix DNA-binding domain superfamily	Homologous Superfamily
A [auth B], B [auth C], C [auth D], D [auth A]	IPR011713	Leucine-rich repeat 3	Repeat
A [auth B], B [auth C], C [auth D], D [auth A]	IPR032675	Leucine-rich repeat domain superfamily	Homologous Superfamily
A [auth B], B [auth C], C [auth D], D [auth A]	IPR035897	Toll/interleukin-1 receptor homology (TIR) domain superfamily	Homologous Superfamily
A [auth B], B [auth C], C [auth D], D [auth A]	IPR058192	Disease resistance protein Roq1-like, winged-helix domain	Domain
A [auth B], B [auth C], C [auth D], D [auth A]	IPR044974	Disease resistance protein, plants	Family
A [auth B], B [auth C], C [auth D], D [auth A]	IPR002182	NB-ARC	Domain
A [auth B], B [auth C], C [auth D], D [auth A]	IPR027417	P-loop containing nucleoside triphosphate hydrolase	Homologous Superfamily

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.