Cryo-EM of the SLFN12-PDE3A complex: PDE3A body refinement
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
| Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| C | d7lrcc_ | All alpha proteins | HD-domain/PDEase-like | HD-domain/PDEase-like | PDEase | automated matches | Human (Homo sapiens ) [TaxId: 9606 ], | SCOPe (2.08) |
| A [auth B] | d7lrcb_ | All alpha proteins | HD-domain/PDEase-like | HD-domain/PDEase-like | PDEase | automated matches | Human (Homo sapiens ) [TaxId: 9606 ], | SCOPe (2.08) |
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| B [auth A] | Nitroreductase | e7lrcA01 | A: alpha bundles | X: Rossmann-like | H: all-alpha NTP pyrophosphatases | T: Hypothetical protein AF_0060 | F: Nitroreductase | ECOD (develop294) |
| C | 14-3-3 | e7lrcC1 | A: alpha bundles | X: CNF1/YfiH-like putative cysteine hydrolases | H: Bromodomain | T: Bromodomain | F: 14-3-3 | ECOD (develop294) |
| A [auth B] | Acetyltransf_1 | e7lrcB1 | A: alpha bundles | X: CNF1/YfiH-like putative cysteine hydrolases | H: Bromodomain | T: Bromodomain | F: Acetyltransf_1 | ECOD (develop294) |
Protein Family Annotation Pfam Database Homepage
| Chains | Accession | Name | Description | Comments | Source |
|---|---|---|---|---|---|
| A [auth B], C | PF00233 | 3'5'-cyclic nucleotide phosphodiesterase (PDEase_I) | 3'5'-cyclic nucleotide phosphodiesterase | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
| Chains | Accession | Name | Type |
|---|---|---|---|
| B [auth A], D | IPR031450 | Poxin-Schlafen/Schlafen-like, N-terminal domain | Domain |
| B [auth A], D | IPR029684 | Schlafen family | Family |
| B [auth A], D | IPR007421 | Schlafen, AlbA_2 domain | Domain |
| B [auth A], D | IPR048729 | Schlafen, GTPase-like domain | Domain |
| B [auth A], D | IPR038461 | Schlafen, AlbA_2 domain superfamily | Homologous Superfamily |
| A [auth B], C | IPR036971 | 3'5'-cyclic nucleotide phosphodiesterase, catalytic domain superfamily | Homologous Superfamily |
| A [auth B], C | IPR023174 | 3'5'-cyclic nucleotide phosphodiesterase, conserved site | Conserved Site |
| A [auth B], C | IPR003607 | HD/PDEase domain | Domain |
| A [auth B], C | IPR002073 | 3'5'-cyclic nucleotide phosphodiesterase, catalytic domain | Domain |














