7NFY

P1a-state of wild type human mitochondrial LONP1 protease with bound substrate protein and ATPgS


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
ASCOP2B SuperfamilyRibosomal protein S5 domain 2-like 8075401 3000100 SCOP2B (2022-06-29)
BSCOP2B SuperfamilyRibosomal protein S5 domain 2-like 8075401 3000100 SCOP2B (2022-06-29)
DSCOP2B SuperfamilyRibosomal protein S5 domain 2-like 8075401 3000100 SCOP2B (2022-06-29)
CSCOP2B SuperfamilyRibosomal protein S5 domain 2-like 8075401 3000100 SCOP2B (2022-06-29)
ESCOP2B SuperfamilyRibosomal protein S5 domain 2-like 8075401 3000100 SCOP2B (2022-06-29)
FSCOP2B SuperfamilyRibosomal protein S5 domain 2-like 8075401 3000100 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
ALON_substr_bdge7nfyA5 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: PUA domainF: LON_substr_bdgECOD (1.6)
ALone7nfyA4 A: alpha arraysX: Histone-likeH: Histone-relatedT: AAA+ ATPase lid domainF: LonECOD (1.6)
ALon_C_Ne7nfyA2 A: a+b two layersX: Ribosomal protein S5 domain 2-like (From Topology)H: Ribosomal protein S5 domain 2-like (From Topology)T: Ribosomal protein S5 domain 2-likeF: Lon_C_NECOD (1.6)
ASigma54_activate7nfyA1 A: a/b three-layered sandwichesX: P-loop domains-likeH: P-loop domains-relatedT: P-loop containing nucleoside triphosphate hydrolasesF: Sigma54_activatECOD (1.6)
ALon_C_Ce7nfyA3 A: a/b three-layered sandwichesX: C-terminal subdomain in Lon-related proteases catalytic domains (From Topology)H: C-terminal subdomain in Lon-related proteases catalytic domains (From Topology)T: C-terminal subdomain in Lon-related proteases catalytic domainsF: Lon_C_CECOD (1.6)
BLON_substr_bdge7nfyB5 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: PUA domainF: LON_substr_bdgECOD (1.6)
BLone7nfyB4 A: alpha arraysX: Histone-likeH: Histone-relatedT: AAA+ ATPase lid domainF: LonECOD (1.6)
BLon_C_Ne7nfyB2 A: a+b two layersX: Ribosomal protein S5 domain 2-like (From Topology)H: Ribosomal protein S5 domain 2-like (From Topology)T: Ribosomal protein S5 domain 2-likeF: Lon_C_NECOD (1.6)
BSigma54_activate7nfyB1 A: a/b three-layered sandwichesX: P-loop domains-likeH: P-loop domains-relatedT: P-loop containing nucleoside triphosphate hydrolasesF: Sigma54_activatECOD (1.6)
BLon_C_Ce7nfyB3 A: a/b three-layered sandwichesX: C-terminal subdomain in Lon-related proteases catalytic domains (From Topology)H: C-terminal subdomain in Lon-related proteases catalytic domains (From Topology)T: C-terminal subdomain in Lon-related proteases catalytic domainsF: Lon_C_CECOD (1.6)
DLON_substr_bdge7nfyD5 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: PUA domainF: LON_substr_bdgECOD (1.6)
DLone7nfyD4 A: alpha arraysX: Histone-likeH: Histone-relatedT: AAA+ ATPase lid domainF: LonECOD (1.6)
DLon_C_Ne7nfyD2 A: a+b two layersX: Ribosomal protein S5 domain 2-like (From Topology)H: Ribosomal protein S5 domain 2-like (From Topology)T: Ribosomal protein S5 domain 2-likeF: Lon_C_NECOD (1.6)
DSigma54_activate7nfyD1 A: a/b three-layered sandwichesX: P-loop domains-likeH: P-loop domains-relatedT: P-loop containing nucleoside triphosphate hydrolasesF: Sigma54_activatECOD (1.6)
DLon_C_Ce7nfyD3 A: a/b three-layered sandwichesX: C-terminal subdomain in Lon-related proteases catalytic domains (From Topology)H: C-terminal subdomain in Lon-related proteases catalytic domains (From Topology)T: C-terminal subdomain in Lon-related proteases catalytic domainsF: Lon_C_CECOD (1.6)
CLON_substr_bdge7nfyC5 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: PUA domainF: LON_substr_bdgECOD (1.6)
CLone7nfyC4 A: alpha arraysX: Histone-likeH: Histone-relatedT: AAA+ ATPase lid domainF: LonECOD (1.6)
CLon_C_Ne7nfyC2 A: a+b two layersX: Ribosomal protein S5 domain 2-like (From Topology)H: Ribosomal protein S5 domain 2-like (From Topology)T: Ribosomal protein S5 domain 2-likeF: Lon_C_NECOD (1.6)
CSigma54_activate7nfyC1 A: a/b three-layered sandwichesX: P-loop domains-likeH: P-loop domains-relatedT: P-loop containing nucleoside triphosphate hydrolasesF: Sigma54_activatECOD (1.6)
CLon_C_Ce7nfyC3 A: a/b three-layered sandwichesX: C-terminal subdomain in Lon-related proteases catalytic domains (From Topology)H: C-terminal subdomain in Lon-related proteases catalytic domains (From Topology)T: C-terminal subdomain in Lon-related proteases catalytic domainsF: Lon_C_CECOD (1.6)
ELON_substr_bdge7nfyE5 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: PUA domainF: LON_substr_bdgECOD (1.6)
ELone7nfyE4 A: alpha arraysX: Histone-likeH: Histone-relatedT: AAA+ ATPase lid domainF: LonECOD (1.6)
ELon_C_Ne7nfyE2 A: a+b two layersX: Ribosomal protein S5 domain 2-like (From Topology)H: Ribosomal protein S5 domain 2-like (From Topology)T: Ribosomal protein S5 domain 2-likeF: Lon_C_NECOD (1.6)
ESigma54_activate7nfyE1 A: a/b three-layered sandwichesX: P-loop domains-likeH: P-loop domains-relatedT: P-loop containing nucleoside triphosphate hydrolasesF: Sigma54_activatECOD (1.6)
ELon_C_Ce7nfyE3 A: a/b three-layered sandwichesX: C-terminal subdomain in Lon-related proteases catalytic domains (From Topology)H: C-terminal subdomain in Lon-related proteases catalytic domains (From Topology)T: C-terminal subdomain in Lon-related proteases catalytic domainsF: Lon_C_CECOD (1.6)
FLON_substr_bdge7nfyF5 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: PUA domainF: LON_substr_bdgECOD (1.6)
FLone7nfyF4 A: alpha arraysX: Histone-likeH: Histone-relatedT: AAA+ ATPase lid domainF: LonECOD (1.6)
FLon_C_Ne7nfyF2 A: a+b two layersX: Ribosomal protein S5 domain 2-like (From Topology)H: Ribosomal protein S5 domain 2-like (From Topology)T: Ribosomal protein S5 domain 2-likeF: Lon_C_NECOD (1.6)
FSigma54_activate7nfyF1 A: a/b three-layered sandwichesX: P-loop domains-likeH: P-loop domains-relatedT: P-loop containing nucleoside triphosphate hydrolasesF: Sigma54_activatECOD (1.6)
FLon_C_Ce7nfyF3 A: a/b three-layered sandwichesX: C-terminal subdomain in Lon-related proteases catalytic domains (From Topology)H: C-terminal subdomain in Lon-related proteases catalytic domains (From Topology)T: C-terminal subdomain in Lon-related proteases catalytic domainsF: Lon_C_CECOD (1.6)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A, B, C, D, E
PF02190ATP-dependent protease La (LON) substrate-binding domain (LON_substr_bdg)ATP-dependent protease La (LON) substrate-binding domain- Family
A, B, C, D, E
PF05362Lon protease (S16) C-terminal proteolytic domain (Lon_C)Lon protease (S16) C-terminal proteolytic domainThe Lon serine proteases must hydrolyse ATP to degrade protein substrates. In Escherichia coli, these proteases are involved in turnover of intracellular proteins, including abnormal proteins following heat-shock. The active site for protease activit ...The Lon serine proteases must hydrolyse ATP to degrade protein substrates. In Escherichia coli, these proteases are involved in turnover of intracellular proteins, including abnormal proteins following heat-shock. The active site for protease activity resides in a C-terminal domain. The Lon proteases are classified as family S16 in Merops.
Domain
A, B, C, D, E
PF22667Lon protease AAA+ ATPase lid domain (Lon_lid)Lon protease AAA+ ATPase lid domainThis entry represents the AAA+ ATPase lid domain of Lon proteases [1-5].Domain
A, B, C, D, E
PF00004ATPase family associated with various cellular activities (AAA) (AAA)ATPase family associated with various cellular activities (AAA)AAA family proteins often perform chaperone-like functions that assist in the assembly, operation, or disassembly of protein complexes [2].Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A, B, C, D, E
Lon protease homolog, mitochondrial
substrate protein---

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A, B, C, D, E
IPR015947PUA-like superfamilyHomologous Superfamily
A, B, C, D, E
IPR046336Lon protease, N-terminal domain superfamilyHomologous Superfamily
A, B, C, D, E
IPR003593AAA+ ATPase domainDomain
A, B, C, D, E
IPR027065Lon proteaseFamily
A, B, C, D, E
IPR008268Peptidase S16, active siteActive Site
A, B, C, D, E
IPR003959ATPase, AAA-type, coreDomain
A, B, C, D, E
IPR020568Ribosomal protein uS5 domain 2-type superfamilyHomologous Superfamily
A, B, C, D, E
IPR027417P-loop containing nucleoside triphosphate hydrolaseHomologous Superfamily
A, B, C, D, E
IPR014721Small ribosomal subunit protein uS5 domain 2-type fold, subgroupHomologous Superfamily
A, B, C, D, E
IPR003111Lon protease, N-terminal domainDomain
A, B, C, D, E
IPR004815Lon protease, bacterial/eukaryotic-typeFamily
A, B, C, D, E
IPR008269Peptidase S16, Lon proteolytic domainDomain
A, B, C, D, E
IPR027503Lon protease homologue, chloroplastic/mitochondrialFamily

Pharos: Disease Associations Pharos Homepage Annotation