7NVN
Human TRiC complex in closed state with nanobody and tubulin bound
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | Cpn60_TCP1_1st | e7nvnA3 | A: alpha bundles | X: GroEL equatorial domain-like (From Topology) | H: GroEL equatorial domain-like (From Topology) | T: GroEL equatorial domain-like | F: Cpn60_TCP1_1st | ECOD (1.6) |
A | Cpn60_TCP1_2nd | e7nvnA1 | A: a/b three-layered sandwiches | X: The swivelling beta/beta/alpha domains | H: The swivelling beta/beta/alpha domain (From Topology) | T: The swivelling beta/beta/alpha domain | F: Cpn60_TCP1_2nd | ECOD (1.6) |
A | Cpn60_TCP1_2nd_1 | e7nvnA2 | A: mixed a+b and a/b | X: Zincin-like | H: GroEL-intermediate domain like (From Topology) | T: GroEL-intermediate domain like | F: Cpn60_TCP1_2nd_1 | ECOD (1.6) |
J [auth a] | Cpn60_TCP1_1st | e7nvna3 | A: alpha bundles | X: GroEL equatorial domain-like (From Topology) | H: GroEL equatorial domain-like (From Topology) | T: GroEL equatorial domain-like | F: Cpn60_TCP1_1st | ECOD (1.6) |
J [auth a] | Cpn60_TCP1_2nd | e7nvna1 | A: a/b three-layered sandwiches | X: The swivelling beta/beta/alpha domains | H: The swivelling beta/beta/alpha domain (From Topology) | T: The swivelling beta/beta/alpha domain | F: Cpn60_TCP1_2nd | ECOD (1.6) |
J [auth a] | Cpn60_TCP1_2nd_1 | e7nvna2 | A: mixed a+b and a/b | X: Zincin-like | H: GroEL-intermediate domain like (From Topology) | T: GroEL-intermediate domain like | F: Cpn60_TCP1_2nd_1 | ECOD (1.6) |
B | Cpn60_TCP1_1st | e7nvnB2 | A: alpha bundles | X: GroEL equatorial domain-like (From Topology) | H: GroEL equatorial domain-like (From Topology) | T: GroEL equatorial domain-like | F: Cpn60_TCP1_1st | ECOD (1.6) |
B | Cpn60_TCP1_2nd | e7nvnB3 | A: a/b three-layered sandwiches | X: The swivelling beta/beta/alpha domains | H: The swivelling beta/beta/alpha domain (From Topology) | T: The swivelling beta/beta/alpha domain | F: Cpn60_TCP1_2nd | ECOD (1.6) |
B | Cpn60_TCP1_2nd_1 | e7nvnB1 | A: mixed a+b and a/b | X: Zincin-like | H: GroEL-intermediate domain like (From Topology) | T: GroEL-intermediate domain like | F: Cpn60_TCP1_2nd_1 | ECOD (1.6) |
K [auth b] | Cpn60_TCP1_1st | e7nvnb3 | A: alpha bundles | X: GroEL equatorial domain-like (From Topology) | H: GroEL equatorial domain-like (From Topology) | T: GroEL equatorial domain-like | F: Cpn60_TCP1_1st | ECOD (1.6) |
K [auth b] | Cpn60_TCP1_2nd | e7nvnb1 | A: a/b three-layered sandwiches | X: The swivelling beta/beta/alpha domains | H: The swivelling beta/beta/alpha domain (From Topology) | T: The swivelling beta/beta/alpha domain | F: Cpn60_TCP1_2nd | ECOD (1.6) |
K [auth b] | Cpn60_TCP1_2nd_1 | e7nvnb2 | A: mixed a+b and a/b | X: Zincin-like | H: GroEL-intermediate domain like (From Topology) | T: GroEL-intermediate domain like | F: Cpn60_TCP1_2nd_1 | ECOD (1.6) |
C [auth D] | Cpn60_TCP1_1st | e7nvnD1 | A: alpha bundles | X: GroEL equatorial domain-like (From Topology) | H: GroEL equatorial domain-like (From Topology) | T: GroEL equatorial domain-like | F: Cpn60_TCP1_1st | ECOD (1.6) |
C [auth D] | Cpn60_TCP1_2nd | e7nvnD3 | A: a/b three-layered sandwiches | X: The swivelling beta/beta/alpha domains | H: The swivelling beta/beta/alpha domain (From Topology) | T: The swivelling beta/beta/alpha domain | F: Cpn60_TCP1_2nd | ECOD (1.6) |
C [auth D] | Cpn60_TCP1_2nd_1 | e7nvnD2 | A: mixed a+b and a/b | X: Zincin-like | H: GroEL-intermediate domain like (From Topology) | T: GroEL-intermediate domain like | F: Cpn60_TCP1_2nd_1 | ECOD (1.6) |
L [auth d] | Cpn60_TCP1_1st | e7nvnd1 | A: alpha bundles | X: GroEL equatorial domain-like (From Topology) | H: GroEL equatorial domain-like (From Topology) | T: GroEL equatorial domain-like | F: Cpn60_TCP1_1st | ECOD (1.6) |
L [auth d] | Cpn60_TCP1_2nd | e7nvnd2 | A: a/b three-layered sandwiches | X: The swivelling beta/beta/alpha domains | H: The swivelling beta/beta/alpha domain (From Topology) | T: The swivelling beta/beta/alpha domain | F: Cpn60_TCP1_2nd | ECOD (1.6) |
L [auth d] | Cpn60_TCP1_2nd_1 | e7nvnd3 | A: mixed a+b and a/b | X: Zincin-like | H: GroEL-intermediate domain like (From Topology) | T: GroEL-intermediate domain like | F: Cpn60_TCP1_2nd_1 | ECOD (1.6) |
D [auth E] | Cpn60_TCP1_1st | e7nvnE3 | A: alpha bundles | X: GroEL equatorial domain-like (From Topology) | H: GroEL equatorial domain-like (From Topology) | T: GroEL equatorial domain-like | F: Cpn60_TCP1_1st | ECOD (1.6) |
D [auth E] | Cpn60_TCP1_2nd | e7nvnE2 | A: a/b three-layered sandwiches | X: The swivelling beta/beta/alpha domains | H: The swivelling beta/beta/alpha domain (From Topology) | T: The swivelling beta/beta/alpha domain | F: Cpn60_TCP1_2nd | ECOD (1.6) |
D [auth E] | Cpn60_TCP1_2nd_1 | e7nvnE1 | A: mixed a+b and a/b | X: Zincin-like | H: GroEL-intermediate domain like (From Topology) | T: GroEL-intermediate domain like | F: Cpn60_TCP1_2nd_1 | ECOD (1.6) |
M [auth e] | Cpn60_TCP1_1st | e7nvne1 | A: alpha bundles | X: GroEL equatorial domain-like (From Topology) | H: GroEL equatorial domain-like (From Topology) | T: GroEL equatorial domain-like | F: Cpn60_TCP1_1st | ECOD (1.6) |
M [auth e] | Cpn60_TCP1_2nd | e7nvne2 | A: a/b three-layered sandwiches | X: The swivelling beta/beta/alpha domains | H: The swivelling beta/beta/alpha domain (From Topology) | T: The swivelling beta/beta/alpha domain | F: Cpn60_TCP1_2nd | ECOD (1.6) |
M [auth e] | Cpn60_TCP1_2nd_1 | e7nvne3 | A: mixed a+b and a/b | X: Zincin-like | H: GroEL-intermediate domain like (From Topology) | T: GroEL-intermediate domain like | F: Cpn60_TCP1_2nd_1 | ECOD (1.6) |
E [auth G] | Cpn60_TCP1_1st | e7nvnG1 | A: alpha bundles | X: GroEL equatorial domain-like (From Topology) | H: GroEL equatorial domain-like (From Topology) | T: GroEL equatorial domain-like | F: Cpn60_TCP1_1st | ECOD (1.6) |
E [auth G] | Cpn60_TCP1_2nd | e7nvnG3 | A: a/b three-layered sandwiches | X: The swivelling beta/beta/alpha domains | H: The swivelling beta/beta/alpha domain (From Topology) | T: The swivelling beta/beta/alpha domain | F: Cpn60_TCP1_2nd | ECOD (1.6) |
E [auth G] | Cpn60_TCP1_2nd_1 | e7nvnG2 | A: mixed a+b and a/b | X: Zincin-like | H: GroEL-intermediate domain like (From Topology) | T: GroEL-intermediate domain like | F: Cpn60_TCP1_2nd_1 | ECOD (1.6) |
N [auth g] | Cpn60_TCP1_1st | e7nvng3 | A: alpha bundles | X: GroEL equatorial domain-like (From Topology) | H: GroEL equatorial domain-like (From Topology) | T: GroEL equatorial domain-like | F: Cpn60_TCP1_1st | ECOD (1.6) |
N [auth g] | Cpn60_TCP1_2nd | e7nvng2 | A: a/b three-layered sandwiches | X: The swivelling beta/beta/alpha domains | H: The swivelling beta/beta/alpha domain (From Topology) | T: The swivelling beta/beta/alpha domain | F: Cpn60_TCP1_2nd | ECOD (1.6) |
N [auth g] | Cpn60_TCP1_2nd_1 | e7nvng1 | A: mixed a+b and a/b | X: Zincin-like | H: GroEL-intermediate domain like (From Topology) | T: GroEL-intermediate domain like | F: Cpn60_TCP1_2nd_1 | ECOD (1.6) |
O [auth h] | Cpn60_TCP1_1st | e7nvnh1 | A: alpha bundles | X: GroEL equatorial domain-like (From Topology) | H: GroEL equatorial domain-like (From Topology) | T: GroEL equatorial domain-like | F: Cpn60_TCP1_1st | ECOD (1.6) |
O [auth h] | Cpn60_TCP1_2nd | e7nvnh3 | A: a/b three-layered sandwiches | X: The swivelling beta/beta/alpha domains | H: The swivelling beta/beta/alpha domain (From Topology) | T: The swivelling beta/beta/alpha domain | F: Cpn60_TCP1_2nd | ECOD (1.6) |
O [auth h] | Cpn60_TCP1_2nd_1 | e7nvnh2 | A: mixed a+b and a/b | X: Zincin-like | H: GroEL-intermediate domain like (From Topology) | T: GroEL-intermediate domain like | F: Cpn60_TCP1_2nd_1 | ECOD (1.6) |
F [auth H] | Cpn60_TCP1_1st | e7nvnH3 | A: alpha bundles | X: GroEL equatorial domain-like (From Topology) | H: GroEL equatorial domain-like (From Topology) | T: GroEL equatorial domain-like | F: Cpn60_TCP1_1st | ECOD (1.6) |
F [auth H] | Cpn60_TCP1_2nd | e7nvnH1 | A: a/b three-layered sandwiches | X: The swivelling beta/beta/alpha domains | H: The swivelling beta/beta/alpha domain (From Topology) | T: The swivelling beta/beta/alpha domain | F: Cpn60_TCP1_2nd | ECOD (1.6) |
F [auth H] | Cpn60_TCP1_2nd_1 | e7nvnH2 | A: mixed a+b and a/b | X: Zincin-like | H: GroEL-intermediate domain like (From Topology) | T: GroEL-intermediate domain like | F: Cpn60_TCP1_2nd_1 | ECOD (1.6) |
P [auth n] | V-set_8 | e7nvnn1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: V-set_8 | ECOD (1.6) |
G [auth N] | V-set_8 | e7nvnN1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: V-set_8 | ECOD (1.6) |
H [auth Q] | Cpn60_TCP1_1st | e7nvnQ3 | A: alpha bundles | X: GroEL equatorial domain-like (From Topology) | H: GroEL equatorial domain-like (From Topology) | T: GroEL equatorial domain-like | F: Cpn60_TCP1_1st | ECOD (1.6) |
H [auth Q] | Cpn60_TCP1_2nd | e7nvnQ2 | A: a/b three-layered sandwiches | X: The swivelling beta/beta/alpha domains | H: The swivelling beta/beta/alpha domain (From Topology) | T: The swivelling beta/beta/alpha domain | F: Cpn60_TCP1_2nd | ECOD (1.6) |
H [auth Q] | Cpn60_TCP1_3rd | e7nvnQ1 | A: mixed a+b and a/b | X: Zincin-like | H: GroEL-intermediate domain like (From Topology) | T: GroEL-intermediate domain like | F: Cpn60_TCP1_3rd | ECOD (1.6) |
Q [auth q] | Cpn60_TCP1_1st | e7nvnq3 | A: alpha bundles | X: GroEL equatorial domain-like (From Topology) | H: GroEL equatorial domain-like (From Topology) | T: GroEL equatorial domain-like | F: Cpn60_TCP1_1st | ECOD (1.6) |
Q [auth q] | Cpn60_TCP1_2nd | e7nvnq2 | A: a/b three-layered sandwiches | X: The swivelling beta/beta/alpha domains | H: The swivelling beta/beta/alpha domain (From Topology) | T: The swivelling beta/beta/alpha domain | F: Cpn60_TCP1_2nd | ECOD (1.6) |
Q [auth q] | Cpn60_TCP1_3rd | e7nvnq1 | A: mixed a+b and a/b | X: Zincin-like | H: GroEL-intermediate domain like (From Topology) | T: GroEL-intermediate domain like | F: Cpn60_TCP1_3rd | ECOD (1.6) |
I [auth Z] | Cpn60_TCP1_1st | e7nvnZ2 | A: alpha bundles | X: GroEL equatorial domain-like (From Topology) | H: GroEL equatorial domain-like (From Topology) | T: GroEL equatorial domain-like | F: Cpn60_TCP1_1st | ECOD (1.6) |
I [auth Z] | Cpn60_TCP1_2nd | e7nvnZ3 | A: a/b three-layered sandwiches | X: The swivelling beta/beta/alpha domains | H: The swivelling beta/beta/alpha domain (From Topology) | T: The swivelling beta/beta/alpha domain | F: Cpn60_TCP1_2nd | ECOD (1.6) |
I [auth Z] | Cpn60_TCP1_2nd_1 | e7nvnZ1 | A: mixed a+b and a/b | X: Zincin-like | H: GroEL-intermediate domain like (From Topology) | T: GroEL-intermediate domain like | F: Cpn60_TCP1_2nd_1 | ECOD (1.6) |
R [auth z] | Cpn60_TCP1_1st | e7nvnz1 | A: alpha bundles | X: GroEL equatorial domain-like (From Topology) | H: GroEL equatorial domain-like (From Topology) | T: GroEL equatorial domain-like | F: Cpn60_TCP1_1st | ECOD (1.6) |
R [auth z] | Cpn60_TCP1_2nd | e7nvnz2 | A: a/b three-layered sandwiches | X: The swivelling beta/beta/alpha domains | H: The swivelling beta/beta/alpha domain (From Topology) | T: The swivelling beta/beta/alpha domain | F: Cpn60_TCP1_2nd | ECOD (1.6) |
R [auth z] | Cpn60_TCP1_2nd_1 | e7nvnz3 | A: mixed a+b and a/b | X: Zincin-like | H: GroEL-intermediate domain like (From Topology) | T: GroEL-intermediate domain like | F: Cpn60_TCP1_2nd_1 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 3.50.7.10 | Alpha Beta | 3-Layer(bba) Sandwich | GroEL | GroEL | CATH (utative) |
J [auth a] | 3.50.7.10 | Alpha Beta | 3-Layer(bba) Sandwich | GroEL | GroEL | CATH (utative) |
B | 3.50.7.10 | Alpha Beta | 3-Layer(bba) Sandwich | GroEL | GroEL | CATH (utative) |
K [auth b] | 3.50.7.10 | Alpha Beta | 3-Layer(bba) Sandwich | GroEL | GroEL | CATH (utative) |
D [auth E] | 3.50.7.10 | Alpha Beta | 3-Layer(bba) Sandwich | GroEL | GroEL | CATH (utative) |
M [auth e] | 3.50.7.10 | Alpha Beta | 3-Layer(bba) Sandwich | GroEL | GroEL | CATH (utative) |
O [auth h] | 3.50.7.10 | Alpha Beta | 3-Layer(bba) Sandwich | GroEL | GroEL | CATH (utative) |
F [auth H] | 3.50.7.10 | Alpha Beta | 3-Layer(bba) Sandwich | GroEL | GroEL | CATH (utative) |
P [auth n] | 2.60.40.10 | Mainly Beta | Sandwich | Immunoglobulin-like | Immunoglobulins | CATH (utative) |
G [auth N] | 2.60.40.10 | Mainly Beta | Sandwich | Immunoglobulin-like | Immunoglobulins | CATH (utative) |
SAbDab Antibody Annotation SAbDab Database Homepage
Chain | Chain Class | Chain Subclass | Chain Type | Antigen Name(s) | Provenance Source |
---|---|---|---|---|---|
G [auth N], P [auth n] | Heavy Chain | IGHV1 | - | t-complex protein 1 subunit epsilon | SAbDab (2025-02-28) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
A, J [auth a] | PF00118 | TCP-1/cpn60 chaperonin family (Cpn60_TCP1) | TCP-1/cpn60 chaperonin family | - | Family |
S [auth T] | PF00091 | Tubulin/FtsZ family, GTPase domain (Tubulin) | Tubulin/FtsZ family, GTPase domain | This family includes the tubulin alpha, beta and gamma chains, as well as the bacterial FtsZ family of proteins. Members of this family are involved in polymer formation. FtsZ is the polymer-forming protein of bacterial cell division. It is part of a ... | Domain |
S [auth T] | PF03953 | Tubulin C-terminal domain (Tubulin_C) | Tubulin C-terminal domain | This family includes the tubulin alpha, beta and gamma chains. Members of this family are involved in polymer formation. Tubulins are GTPases. FtsZ can polymerise into tubes, sheets, and rings in vitro and is ubiquitous in eubacteria and archaea. Tub ... | Domain |
B, K [auth b] | PF00118 | TCP-1/cpn60 chaperonin family (Cpn60_TCP1) | TCP-1/cpn60 chaperonin family | - | Family |
C [auth D], L [auth d] | PF00118 | TCP-1/cpn60 chaperonin family (Cpn60_TCP1) | TCP-1/cpn60 chaperonin family | - | Family |
D [auth E], M [auth e] | PF00118 | TCP-1/cpn60 chaperonin family (Cpn60_TCP1) | TCP-1/cpn60 chaperonin family | - | Family |
E [auth G], N [auth g] | PF00118 | TCP-1/cpn60 chaperonin family (Cpn60_TCP1) | TCP-1/cpn60 chaperonin family | - | Family |
F [auth H], O [auth h] | PF00118 | TCP-1/cpn60 chaperonin family (Cpn60_TCP1) | TCP-1/cpn60 chaperonin family | - | Family |
H [auth Q], Q [auth q] | PF00118 | TCP-1/cpn60 chaperonin family (Cpn60_TCP1) | TCP-1/cpn60 chaperonin family | - | Family |
I [auth Z], R [auth z] | PF00118 | TCP-1/cpn60 chaperonin family (Cpn60_TCP1) | TCP-1/cpn60 chaperonin family | - | Family |