7OBQ | pdb_00007obq

SRP-SR at the distal site conformation


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
E [auth v]SCOP2B SuperfamilyRas-like P-loop GTPases 8097820 3002022 SCOP2B (2022-06-29)
D [auth u]SCOP2B SuperfamilyTPR-like 8053750 3001345 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
B [auth q]e7obqq1 A: Family A G protein-coupled receptor-likeX: Family A G protein-coupled receptor-likeH: Family A G protein-coupled receptor-likeT: zf-C3HC4F:ECOD (20:10:01)
E [auth v]e7obqv1 A: Family A G protein-coupled receptor-likeX: Family A G protein-coupled receptor-likeH: Family A G protein-coupled receptor-likeT: Ribosomal_L14eF:ECOD (20:10:01)
F [auth x]e7obqx1 A: Family A G protein-coupled receptor-likeX: Family A G protein-coupled receptor-likeH: Family A G protein-coupled receptor-likeT: zf-C3HC4F:ECOD (20:10:01)
G [auth y]e7obqy1 A: Family A G protein-coupled receptor-likeX: Family A G protein-coupled receptor-likeH: Family A G protein-coupled receptor-likeT: Ribosomal_L14eF:ECOD (20:10:01)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
G [auth y]3.30.450.60 Alpha Beta 2-Layer Sandwich Beta-Lactamase CATH (utative)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A [auth 1]SRP RNA---
B [auth q]Signal recognition particle 19
C [auth s]EM14S01-3B_G0054400.mRNA.1.CDS.1---
E [auth v]Signal recognition particle receptor subunit beta
F [auth x]Signal recognition particle 54 kDa protein
G [auth y]SRP receptor subunit alpha
H [auth z]Signal recognition particle subunit SRP72
D [auth u]Signal recognition particle subunit SRP68,Signal recognition particle subunit SRP68

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
B [auth q]IPR002778Signal recognition particle, SRP19 subunitFamily
B [auth q]IPR036521Signal recognition particle, subunit SRP19-like superfamilyHomologous Superfamily
E [auth v]IPR024156Small GTPase superfamily, ARF typeFamily
E [auth v]IPR027417P-loop containing nucleoside triphosphate hydrolaseHomologous Superfamily
E [auth v]IPR019009Signal recognition particle receptor, beta subunitFamily
F [auth x]IPR000897Signal recognition particle, SRP54 subunit, GTPase domainDomain
F [auth x]IPR004125Signal recognition particle, SRP54 subunit, M-domainDomain
F [auth x]IPR003593AAA+ ATPase domainDomain
F [auth x]IPR013822Signal recognition particle SRP54, helical bundleDomain
F [auth x]IPR027417P-loop containing nucleoside triphosphate hydrolaseHomologous Superfamily
F [auth x]IPR022941Signal recognition particle, SRP54 subunitFamily
F [auth x]IPR036225SRP/SRP receptor, N-terminalHomologous Superfamily
F [auth x]IPR042101Signal recognition particle SRP54, N-terminal domain superfamilyHomologous Superfamily
F [auth x]IPR006325Signal recognition particle, SRP54 subunit, eukaryoticFamily
F [auth x]IPR036891Signal recognition particle, SRP54 subunit, M-domain superfamilyHomologous Superfamily
G [auth y]IPR000897Signal recognition particle, SRP54 subunit, GTPase domainDomain
G [auth y]IPR036225SRP/SRP receptor, N-terminalHomologous Superfamily
G [auth y]IPR011012Longin-like domain superfamilyHomologous Superfamily
G [auth y]IPR042101Signal recognition particle SRP54, N-terminal domain superfamilyHomologous Superfamily
G [auth y]IPR003593AAA+ ATPase domainDomain
G [auth y]IPR007222Signal recognition particle receptor, alpha subunit, N-terminalDomain
G [auth y]IPR013822Signal recognition particle SRP54, helical bundleDomain
G [auth y]IPR027417P-loop containing nucleoside triphosphate hydrolaseHomologous Superfamily
H [auth z]IPR013699Signal recognition particle, SRP72 subunit, RNA-bindingDomain
H [auth z]IPR011990Tetratricopeptide-like helical domain superfamilyHomologous Superfamily
H [auth z]IPR031545Signal recognition particle subunit SRP72, TPR-like repeatRepeat
H [auth z]IPR026270Signal recognition particle, SRP72 subunitFamily
H [auth z]IPR019734Tetratricopeptide repeatRepeat
D [auth u]IPR026258Signal recognition particle subunit SRP68Family
D [auth u]IPR038253SRP68, N-terminal domain superfamilyHomologous Superfamily
D [auth u]IPR034652Signal recognition particle subunit SRP68, RNA-binding domainDomain