7PNK

Unstacked compact Dunaliella PSII


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
APhoto_RCe7pnkA1 A: alpha bundlesX: Bacterial photosystem II reaction centre L and M subunits-like (From Topology)H: Bacterial photosystem II reaction centre L and M subunits-like (From Topology)T: Bacterial photosystem II reaction centre L and M subunits-likeF: Photo_RCECOD (1.6)
Y [auth a]Photo_RCe7pnka1 A: alpha bundlesX: Bacterial photosystem II reaction centre L and M subunits-like (From Topology)H: Bacterial photosystem II reaction centre L and M subunits-like (From Topology)T: Bacterial photosystem II reaction centre L and M subunits-likeF: Photo_RCECOD (1.6)
HA [auth j]PsbJe7pnkj1 A: extended segmentsX: Photosystem II reaction center protein J, PsbJ (From Topology)H: Photosystem II reaction center protein J, PsbJ (From Topology)T: Photosystem II reaction center protein J, PsbJF: PsbJECOD (1.6)
JPsbJe7pnkJ1 A: extended segmentsX: Photosystem II reaction center protein J, PsbJ (From Topology)H: Photosystem II reaction center protein J, PsbJ (From Topology)T: Photosystem II reaction center protein J, PsbJF: PsbJECOD (1.6)
IA [auth k]PsbKe7pnkk1 A: extended segmentsX: Photosystem II reaction center protein K, PsbK (From Topology)H: Photosystem II reaction center protein K, PsbK (From Topology)T: Photosystem II reaction center protein K, PsbKF: PsbKECOD (1.6)
KPsbKe7pnkK1 A: extended segmentsX: Photosystem II reaction center protein K, PsbK (From Topology)H: Photosystem II reaction center protein K, PsbK (From Topology)T: Photosystem II reaction center protein K, PsbKF: PsbKECOD (1.6)
JA [auth l]PsbLe7pnkl1 A: extended segmentsX: Photosystem II reaction center protein L, PsbL (From Topology)H: Photosystem II reaction center protein L, PsbL (From Topology)T: Photosystem II reaction center protein L, PsbLF: PsbLECOD (1.6)
LPsbLe7pnkL1 A: extended segmentsX: Photosystem II reaction center protein L, PsbL (From Topology)H: Photosystem II reaction center protein L, PsbL (From Topology)T: Photosystem II reaction center protein L, PsbLF: PsbLECOD (1.6)
KA [auth m]PsbMe7pnkm1 A: extended segmentsX: Photosystem II reaction center protein M, PsbM (From Topology)H: Photosystem II reaction center protein M, PsbM (From Topology)T: Photosystem II reaction center protein M, PsbMF: PsbMECOD (1.6)
MPsbMe7pnkM1 A: extended segmentsX: Photosystem II reaction center protein M, PsbM (From Topology)H: Photosystem II reaction center protein M, PsbM (From Topology)T: Photosystem II reaction center protein M, PsbMF: PsbMECOD (1.6)
LA [auth o]MSPe7pnko1 A: beta barrelsX: Outer membrane meander beta-barrelsH: OMPA-like (From Topology)T: OMPA-likeF: MSPECOD (1.6)
N [auth O]MSPe7pnkO1 A: beta barrelsX: Outer membrane meander beta-barrelsH: OMPA-like (From Topology)T: OMPA-likeF: MSPECOD (1.6)
MA [auth p]PsbPe7pnkp1 A: a+b three layersX: Mog1p/PsbP-likeH: Mog1p/PsbP-like (From Topology)T: Mog1p/PsbP-likeF: PsbPECOD (1.6)
O [auth P]PsbPe7pnkP1 A: a+b three layersX: Mog1p/PsbP-likeH: Mog1p/PsbP-like (From Topology)T: Mog1p/PsbP-likeF: PsbPECOD (1.6)
NA [auth t]PsbTe7pnkt1 A: extended segmentsX: Photosystem II reaction center protein T, PsbT (From Topology)H: Photosystem II reaction center protein T, PsbT (From Topology)T: Photosystem II reaction center protein T, PsbTF: PsbTECOD (1.6)
P [auth T]PsbTe7pnkT1 A: extended segmentsX: Photosystem II reaction center protein T, PsbT (From Topology)H: Photosystem II reaction center protein T, PsbT (From Topology)T: Photosystem II reaction center protein T, PsbTF: PsbTECOD (1.6)
OA [auth w]PsbWe7pnkw1 A: extended segmentsX: Photosystem II reaction center W protein, chloroplastic (From Topology)H: Photosystem II reaction center W protein, chloroplastic (From Topology)T: Photosystem II reaction center W protein, chloroplasticF: PsbWECOD (1.6)
Q [auth W]PsbWe7pnkW1 A: extended segmentsX: Photosystem II reaction center W protein, chloroplastic (From Topology)H: Photosystem II reaction center W protein, chloroplastic (From Topology)T: Photosystem II reaction center W protein, chloroplasticF: PsbWECOD (1.6)
PA [auth x]PsbXe7pnkx1 A: extended segmentsX: Photosystem II PsbX protein (From Topology)H: Photosystem II PsbX protein (From Topology)T: Photosystem II PsbX proteinF: PsbXECOD (1.6)
R [auth X]PsbXe7pnkX1 A: extended segmentsX: Photosystem II PsbX protein (From Topology)H: Photosystem II PsbX protein (From Topology)T: Photosystem II PsbX proteinF: PsbXECOD (1.6)
QA [auth z]Ycf9e7pnkz1 A: extended segmentsX: PsbZ-like (From Topology)H: PsbZ-like (From Topology)T: PsbZ-likeF: Ycf9ECOD (1.6)
S [auth Z]Ycf9e7pnkZ1 A: extended segmentsX: PsbZ-like (From Topology)H: PsbZ-like (From Topology)T: PsbZ-likeF: Ycf9ECOD (1.6)
BPSII_1ste7pnkB2 A: alpha bundlesX: Photosystem II antenna protein-like (From Topology)H: Photosystem II antenna protein-like (From Topology)T: Photosystem II antenna protein-likeF: PSII_1stECOD (1.6)
BPSII_2nde7pnkB1 A: a+b two layersX: Photosystem II antenna protein PsbB insertion domain (From Topology)H: Photosystem II antenna protein PsbB insertion domain (From Topology)T: Photosystem II antenna protein PsbB insertion domainF: PSII_2ndECOD (1.6)
Z [auth b]PSII_1ste7pnkb1 A: alpha bundlesX: Photosystem II antenna protein-like (From Topology)H: Photosystem II antenna protein-like (From Topology)T: Photosystem II antenna protein-likeF: PSII_1stECOD (1.6)
Z [auth b]PSII_2nde7pnkb2 A: a+b two layersX: Photosystem II antenna protein PsbB insertion domain (From Topology)H: Photosystem II antenna protein PsbB insertion domain (From Topology)T: Photosystem II antenna protein PsbB insertion domainF: PSII_2ndECOD (1.6)
T [auth N]Chloroa_b-binde7pnkN1 A: extended segmentsX: Chlorophyll a-b binding protein (From Topology)H: Chlorophyll a-b binding protein (From Topology)T: Chlorophyll a-b binding proteinF: Chloroa_b-bindECOD (1.6)
U [auth G]Chloroa_b-binde7pnkG1 A: extended segmentsX: Chlorophyll a-b binding protein (From Topology)H: Chlorophyll a-b binding protein (From Topology)T: Chlorophyll a-b binding proteinF: Chloroa_b-bindECOD (1.6)
V [auth S]Chloroa_b-binde7pnkS1 A: extended segmentsX: Chlorophyll a-b binding protein (From Topology)H: Chlorophyll a-b binding protein (From Topology)T: Chlorophyll a-b binding proteinF: Chloroa_b-bindECOD (1.6)
W [auth Y]Chloroa_b-binde7pnkY1 A: extended segmentsX: Chlorophyll a-b binding protein (From Topology)H: Chlorophyll a-b binding protein (From Topology)T: Chlorophyll a-b binding proteinF: Chloroa_b-bindECOD (1.6)
AA [auth v]PSII_Ycf12e7pnkv1 A: extended segmentsX: Photosystem II reaction center protein ycf12 (From Topology)H: Photosystem II reaction center protein ycf12 (From Topology)T: Photosystem II reaction center protein ycf12F: PSII_Ycf12ECOD (1.6)
C [auth V]PSII_Ycf12e7pnkV1 A: extended segmentsX: Photosystem II reaction center protein ycf12 (From Topology)H: Photosystem II reaction center protein ycf12 (From Topology)T: Photosystem II reaction center protein ycf12F: PSII_Ycf12ECOD (1.6)
BA [auth c]PSII_1ste7pnkc1 A: alpha bundlesX: Photosystem II antenna protein-like (From Topology)H: Photosystem II antenna protein-like (From Topology)T: Photosystem II antenna protein-likeF: PSII_1stECOD (1.6)
D [auth C]PSII_1ste7pnkC1 A: alpha bundlesX: Photosystem II antenna protein-like (From Topology)H: Photosystem II antenna protein-like (From Topology)T: Photosystem II antenna protein-likeF: PSII_1stECOD (1.6)
CA [auth d]Photo_RCe7pnkd1 A: alpha bundlesX: Bacterial photosystem II reaction centre L and M subunits-like (From Topology)H: Bacterial photosystem II reaction centre L and M subunits-like (From Topology)T: Bacterial photosystem II reaction centre L and M subunits-likeF: Photo_RCECOD (1.6)
E [auth D]Photo_RCe7pnkD1 A: alpha bundlesX: Bacterial photosystem II reaction centre L and M subunits-like (From Topology)H: Bacterial photosystem II reaction centre L and M subunits-like (From Topology)T: Bacterial photosystem II reaction centre L and M subunits-likeF: Photo_RCECOD (1.6)
DA [auth e]Cytochrom_B559ae7pnke1 A: extended segmentsX: Cytochrome b559 subunits (From Topology)H: Cytochrome b559 subunits (From Topology)T: Cytochrome b559 subunitsF: Cytochrom_B559aECOD (1.6)
F [auth E]Cytochrom_B559ae7pnkE1 A: extended segmentsX: Cytochrome b559 subunits (From Topology)H: Cytochrome b559 subunits (From Topology)T: Cytochrome b559 subunitsF: Cytochrom_B559aECOD (1.6)
EA [auth f]Cytochrom_B559e7pnkf1 A: extended segmentsX: Cytochrome b559 subunits (From Topology)H: Cytochrome b559 subunits (From Topology)T: Cytochrome b559 subunitsF: Cytochrom_B559ECOD (1.6)
G [auth F]Cytochrom_B559e7pnkF1 A: extended segmentsX: Cytochrome b559 subunits (From Topology)H: Cytochrome b559 subunits (From Topology)T: Cytochrome b559 subunitsF: Cytochrom_B559ECOD (1.6)
FA [auth h]PsbHe7pnkh1 A: extended segmentsX: Photosystem II 10 kDa phosphoprotein PsbH (From Topology)H: Photosystem II 10 kDa phosphoprotein PsbH (From Topology)T: Photosystem II 10 kDa phosphoprotein PsbHF: PsbHECOD (1.6)
HPsbHe7pnkH1 A: extended segmentsX: Photosystem II 10 kDa phosphoprotein PsbH (From Topology)H: Photosystem II 10 kDa phosphoprotein PsbH (From Topology)T: Photosystem II 10 kDa phosphoprotein PsbHF: PsbHECOD (1.6)
GA [auth i]PsbIe7pnki1 A: extended segmentsX: Photosystem II reaction center protein I, PsbI (From Topology)H: Photosystem II reaction center protein I, PsbI (From Topology)T: Photosystem II reaction center protein I, PsbIF: PsbIECOD (1.6)
IPsbIe7pnkI1 A: extended segmentsX: Photosystem II reaction center protein I, PsbI (From Topology)H: Photosystem II reaction center protein I, PsbI (From Topology)T: Photosystem II reaction center protein I, PsbIF: PsbIECOD (1.6)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A,
Y [auth a]
PF00124Photosynthetic reaction centre protein (Photo_RC)Photosynthetic reaction centre protein- Family
HA [auth j],
J
PF01788PsbJ (PsbJ)PsbJ- Family
IA [auth k],
K
PF02533Photosystem II 4 kDa reaction centre component (PsbK)Photosystem II 4 kDa reaction centre component- Family
JA [auth l],
L
PF02419PsbL protein (PsbL)PsbL protein- Family
KA [auth m],
M
PF05151Photosystem II reaction centre M protein (PsbM) (PsbM)Photosystem II reaction centre M protein (PsbM)- Family
NA [auth t],
P [auth T]
PF01405Photosystem II reaction centre T protein (PsbT)Photosystem II reaction centre T protein- Family
QA [auth z],
S [auth Z]
PF01737YCF9 (Ycf9)YCF9- Family
B,
Z [auth b]
PF00421Photosystem II protein (PSII)Photosystem II protein- Family
U [auth G]PF00504Chlorophyll A-B binding protein (Chloroa_b-bind)Chlorophyll A-B binding protein- Family
AA [auth v],
C [auth V]
PF05969Photosystem II complex subunit Ycf12 (PSII_Ycf12)Photosystem II complex subunit Ycf12- Family
BA [auth c],
D [auth C]
PF00421Photosystem II protein (PSII)Photosystem II protein- Family
CA [auth d],
E [auth D]
PF00124Photosynthetic reaction centre protein (Photo_RC)Photosynthetic reaction centre protein- Family
DA [auth e],
F [auth E]
PF00283Cytochrome b559, alpha (gene psbE) and beta (gene psbF)subunits (Cytochrom_B559)Cytochrome b559, alpha (gene psbE) and beta (gene psbF)subunits- Family
DA [auth e],
F [auth E]
PF00284Lumenal portion of Cytochrome b559, alpha (gene psbE) subunit (Cytochrom_B559a)Lumenal portion of Cytochrome b559, alpha (gene psbE) subunit- Family
EA [auth f],
G [auth F]
PF00283Cytochrome b559, alpha (gene psbE) and beta (gene psbF)subunits (Cytochrom_B559)Cytochrome b559, alpha (gene psbE) and beta (gene psbF)subunits- Family
FA [auth h],
H
PF00737Photosystem II 10 kDa phosphoprotein (PsbH)Photosystem II 10 kDa phosphoprotein- Family
GA [auth i],
I
PF02532Photosystem II reaction centre I protein (PSII 4.8 kDa protein) (PsbI)Photosystem II reaction centre I protein (PSII 4.8 kDa protein)- Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A,
Y [auth a]
Photosystem II protein D1
HA [auth j],
J
Photosystem II reaction center protein J-
IA [auth k],
K
Photosystem II reaction center protein K-
JA [auth l],
L
Photosystem II reaction center protein L-
KA [auth m],
M
Photosystem II reaction center protein M-
LA [auth o],
N [auth O]
PsbO---
MA [auth p],
O [auth P]
PsbP---
NA [auth t],
P [auth T]
Photosystem II reaction center protein T-
OA [auth w],
Q [auth W]
PsbW---
PA [auth x],
R [auth X]
PsbX---
QA [auth z],
S [auth Z]
Photosystem II reaction center protein Z-
B,
Z [auth b]
Photosystem II CP47 reaction center protein
T [auth N]Chlorophyll a-b binding protein of LHCII type I, chloroplastic---
U [auth G]Chlorophyll a-b binding protein, chloroplastic
V [auth S]CP26---
W [auth Y]LHCII M1---
RA [auth u],
X [auth U]
PsbU---
AA [auth v],
C [auth V]
Photosystem II reaction center protein Ycf12-
BA [auth c],
D [auth C]
Photosystem II CP43 reaction center protein
CA [auth d],
E [auth D]
Photosystem II D2 protein
DA [auth e],
F [auth E]
Cytochrome b559 subunit alpha
EA [auth f],
G [auth F]
Cytochrome b559 subunit beta
FA [auth h],
H
Photosystem II reaction center protein H
GA [auth i],
I
Photosystem II reaction center protein I-

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A,
Y [auth a]
IPR036854Photosystem II protein D1/D2 superfamilyHomologous Superfamily
A,
Y [auth a]
IPR005867Photosystem II protein D1Family
A,
Y [auth a]
IPR000484Photosynthetic reaction centre, L/MFamily
A,
Y [auth a]
IPR055265Photosynthetic reaction centre, L/M, conserved siteConserved Site
A,
Y [auth a]
IPR055266Photosystem II protein D1/D2Family
HA [auth j],
J
IPR002682Photosystem II PsbJFamily
HA [auth j],
J
IPR037267Photosystem II PsbJ superfamilyHomologous Superfamily
IA [auth k],
K
IPR037270Photosystem II PsbK superfamilyHomologous Superfamily
IA [auth k],
K
IPR003687Photosystem II PsbKFamily
JA [auth l],
L
IPR003372Photosystem II PsbLFamily
JA [auth l],
L
IPR037266Photosystem II PsbL superfamilyHomologous Superfamily
KA [auth m],
M
IPR007826Photosystem II PsbMFamily
KA [auth m],
M
IPR037269Photosystem II PsbM superfamilyHomologous Superfamily
NA [auth t],
P [auth T]
IPR001743Photosystem II PsbTFamily
NA [auth t],
P [auth T]
IPR037268Photosystem II PsbT superfamilyHomologous Superfamily
QA [auth z],
S [auth Z]
IPR036512Photosystem II PsbZ superfamilyHomologous Superfamily
QA [auth z],
S [auth Z]
IPR002644Photosystem II PsbZ, reaction centreFamily
B,
Z [auth b]
IPR036001Photosystem antenna protein-like superfamilyHomologous Superfamily
B,
Z [auth b]
IPR000932Photosystem antenna protein-likeFamily
B,
Z [auth b]
IPR017486Photosystem II CP47 reaction centre proteinFamily
U [auth G]IPR001344Chlorophyll A-B binding protein, plant and chromistaFamily
U [auth G]IPR022796Chlorophyll A-B binding proteinFamily
AA [auth v],
C [auth V]
IPR010284Photosystem II reaction center protein Ycf12Family
BA [auth c],
D [auth C]
IPR036001Photosystem antenna protein-like superfamilyHomologous Superfamily
BA [auth c],
D [auth C]
IPR000932Photosystem antenna protein-likeFamily
BA [auth c],
D [auth C]
IPR005869Photosystem II CP43 reaction centre proteinFamily
BA [auth c],
D [auth C]
IPR044900Photosystem II CP43 reaction centre protein superfamilyHomologous Superfamily
CA [auth d],
E [auth D]
IPR005868Photosystem II D2Family
CA [auth d],
E [auth D]
IPR036854Photosystem II protein D1/D2 superfamilyHomologous Superfamily
CA [auth d],
E [auth D]
IPR000484Photosynthetic reaction centre, L/MFamily
CA [auth d],
E [auth D]
IPR055265Photosynthetic reaction centre, L/M, conserved siteConserved Site
CA [auth d],
E [auth D]
IPR055266Photosystem II protein D1/D2Family
DA [auth e],
F [auth E]
IPR013081Photosystem II cytochrome b559, N-terminalDomain
DA [auth e],
F [auth E]
IPR006217Photosystem II cytochrome b559, alpha subunitFamily
DA [auth e],
F [auth E]
IPR013082Photosystem II cytochrome b559, alpha subunit, lumenal regionDomain
DA [auth e],
F [auth E]
IPR037025Photosystem II cytochrome b559, alpha subunit superfamilyHomologous Superfamily
DA [auth e],
F [auth E]
IPR006216Photosystem II cytochrome b559, conserved siteConserved Site
EA [auth f],
G [auth F]
IPR006241Photosystem II cytochrome b559, beta subunitFamily
EA [auth f],
G [auth F]
IPR013081Photosystem II cytochrome b559, N-terminalDomain
EA [auth f],
G [auth F]
IPR006216Photosystem II cytochrome b559, conserved siteConserved Site
FA [auth h],
H
IPR036863Photosystem II reaction centre protein H superfamilyHomologous Superfamily
FA [auth h],
H
IPR001056Photosystem II reaction centre protein HFamily
GA [auth i],
I
IPR037271Photosystem II PsbI superfamilyHomologous Superfamily
GA [auth i],
I
IPR003686Photosystem II PsbIFamily

Protein Modification Annotation

Modified Residue(s)
ChainResidue(s)Description
B,
Z [auth b]
CSD Parent Component: CYS

RESIDAA0262

PSI-MOD :  L-cysteine sulfinic acid MOD:00267