7UJJ
Stx2a and DARPin complex
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
B [auth A] | SCOP2B Superfamily | Ribosome inactivating proteins (RIP) | 8041775 | 3001164 | SCOP2B (2022-06-29) |
C [auth B] | SCOP2B Superfamily | Bacterial enterotoxins | 8040290 | 3000434 | SCOP2B (2022-06-29) |
D [auth C] | SCOP2B Superfamily | Bacterial enterotoxins | 8040290 | 3000434 | SCOP2B (2022-06-29) |
E [auth D] | SCOP2B Superfamily | Bacterial enterotoxins | 8040290 | 3000434 | SCOP2B (2022-06-29) |
F [auth E] | SCOP2B Superfamily | Bacterial enterotoxins | 8040290 | 3000434 | SCOP2B (2022-06-29) |
G [auth F] | SCOP2B Superfamily | Bacterial enterotoxins | 8040290 | 3000434 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A [auth G] | F_UNCLASSIFIED | e7ujjG1 | A: alpha superhelices | X: Repetitive alpha hairpins | H: Ankyrin repeat (From Topology) | T: Ankyrin repeat | F: F_UNCLASSIFIED | ECOD (1.6) |
B [auth A] | F_UNCLASSIFIED | e7ujjA1 | A: a+b two layers | X: RIP/Polo-box domain | H: Ribosome inactivating proteins (RIP) (From Topology) | T: Ribosome inactivating proteins (RIP) | F: F_UNCLASSIFIED | ECOD (1.6) |
C [auth B] | F_UNCLASSIFIED | e7ujjB1 | A: beta barrels | X: OB-fold | H: Bacterial enterotoxins (From Topology) | T: Bacterial enterotoxins | F: F_UNCLASSIFIED | ECOD (1.6) |
D [auth C] | F_UNCLASSIFIED | e7ujjC1 | A: beta barrels | X: OB-fold | H: Bacterial enterotoxins (From Topology) | T: Bacterial enterotoxins | F: F_UNCLASSIFIED | ECOD (1.6) |
E [auth D] | F_UNCLASSIFIED | e7ujjD1 | A: beta barrels | X: OB-fold | H: Bacterial enterotoxins (From Topology) | T: Bacterial enterotoxins | F: F_UNCLASSIFIED | ECOD (1.6) |
F [auth E] | F_UNCLASSIFIED | e7ujjE1 | A: beta barrels | X: OB-fold | H: Bacterial enterotoxins (From Topology) | T: Bacterial enterotoxins | F: F_UNCLASSIFIED | ECOD (1.6) |
G [auth F] | F_UNCLASSIFIED | e7ujjF1 | A: beta barrels | X: OB-fold | H: Bacterial enterotoxins (From Topology) | T: Bacterial enterotoxins | F: F_UNCLASSIFIED | ECOD (1.6) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
B [auth A] | PF00161 | Ribosome inactivating protein (RIP) | Ribosome inactivating protein | - | Domain |
C [auth B], D [auth C], E [auth D], F [auth E], G [auth F] | PF02258 | Shiga-like toxin beta subunit (SLT_beta) | Shiga-like toxin beta subunit | This family represents the B subunit of shiga-like toxin (SLT or verotoxin) produced by some strains of E.coli associated with hemorrhagic colitis and hemolytic uremic syndrome. SLT's are composed of one enzymatic A subunit and five cell binding B s ... | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
B [auth A] | IPR036041 | Ribosome-inactivating protein superfamily | Homologous Superfamily |
B [auth A] | IPR016331 | Shiga-like toxin, subunit A | Family |
B [auth A] | IPR017988 | Ribosome-inactivating protein conserved site | Conserved Site |
B [auth A] | IPR016139 | Ribosome-inactivating protein, subdomain 2 | Homologous Superfamily |
B [auth A] | IPR016138 | Ribosome-inactivating protein, subdomain 1 | Homologous Superfamily |
B [auth A] | IPR001574 | Ribosome-inactivating protein | Family |
C [auth B], D [auth C], E [auth D], F [auth E], G [auth F] | IPR008992 | Enterotoxin | Homologous Superfamily |
C [auth B], D [auth C], E [auth D], F [auth E], G [auth F] | IPR003189 | Shiga-like toxin, beta subunit | Family |