Cryo-EM structure of E.coli retron-Ec86 in complex with its effector at 2.8 angstrom
External Resource: Annotation
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| F [auth B] | Uteroglobin | e7v9xB1 | A: alpha arrays | X: Hypothetical protein YqbG-like | H: Hypothetical protein YqbG-like | T: alpha/beta-Hydrolases | F: Uteroglobin | ECOD (v295.2) |
| A | e7v9xA01 | A: alpha arrays | X: Rossmann-like | H: Rossmann-related | T: FAD/NAD(P)-binding domain | F: | ECOD (v295.2) |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
| Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
|---|---|---|---|---|
| E [auth F], I | RNA (14-MER) | - | - | - |
| D [auth E], H | RNA (81-MER) | - | - | - |
| C [auth D], G | DNA (105-MER) | - | - | - |
| B [auth C] | retron St85 family effector protein | - | - | - |
| A, F [auth B] | RNA-directed DNA polymerase from retron EC86 |
| - | - |
InterPro: Protein Family Classification InterPro Database Homepage
| Chains | Accession | Name | Type |
|---|---|---|---|
| B [auth C] | IPR049725 | STM3845 retron effector protein | Family |
| A, F [auth B] | IPR000477 | Reverse transcriptase domain | Domain |
| A, F [auth B] | IPR051083 | Group II Intron Splicing and Mobility/Defense | Family |
| A, F [auth B] | IPR000123 | RNA-directed DNA polymerase (reverse transcriptase), msDNA | Family |
| A, F [auth B] | IPR043502 | DNA/RNA polymerase superfamily | Homologous Superfamily |