Membrane arm of active state CI from DQ-NADH dataset
External Resource: Annotation
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
| Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
|---|---|---|---|---|---|
| Z [auth s] | SCOP2B Superfamily | Antiporter subunits half-channel-like | 8054145 | 3002280 | SCOP2B (2022-06-29) |
| S [auth k] | SCOP2B Superfamily | NADH-quinone oxidoreductase, subunit 11-like | 8098766 | 3002200 | SCOP2B (2022-06-29) |
| R [auth j] | SCOP2B Superfamily | NADH-quinone oxidoreductase, subunit 11-like | 8106932 | 3002200 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| Y [auth r] | e7vblr1 | A: Family A G protein-coupled receptor-like | X: Family A G protein-coupled receptor-like | H: Family A G protein-coupled receptor-like | T: Aminotran_3 | F: | ECOD (20:10:01) | |
| I [auth a] | e7vbla1 | A: Family A G protein-coupled receptor-like | X: Family A G protein-coupled receptor-like | H: Family A G protein-coupled receptor-like | T: Aminotran_3 | F: | ECOD (20:10:01) | |
| G [auth Y] | e7vblY1 | A: Family A G protein-coupled receptor-like | X: Family A G protein-coupled receptor-like | H: Family A G protein-coupled receptor-like | T: Aminotran_3 | F: | ECOD (20:10:01) | |
| F [auth X] | e7vblX1 | A: Family A G protein-coupled receptor-like | X: Family A G protein-coupled receptor-like | H: Family A G protein-coupled receptor-like | T: Aminotran_3 | F: | ECOD (20:10:01) | |
| E [auth W] | e7vblW1 | A: Family A G protein-coupled receptor-like | X: Family A G protein-coupled receptor-like | H: Family A G protein-coupled receptor-like | T: Aminotran_3 | F: | ECOD (20:10:01) | |
| C [auth U] | e7vblU1 | A: Family A G protein-coupled receptor-like | X: Family A G protein-coupled receptor-like | H: Family A G protein-coupled receptor-like | T: Aminotran_3 | F: | ECOD (20:10:01) | |
| CA [auth w] | e7vblw1 | A: Family A G protein-coupled receptor-like | X: Family A G protein-coupled receptor-like | H: Family A G protein-coupled receptor-like | T: Aminotran_3 | F: | ECOD (20:10:01) | |
| AA [auth u] | e7vblu1 | A: Family A G protein-coupled receptor-like | X: Family A G protein-coupled receptor-like | H: Family A G protein-coupled receptor-like | T: Aminotran_3 | F: | ECOD (20:10:01) | |
| Z [auth s] | e7vbls1 | A: Family A G protein-coupled receptor-like | X: Family A G protein-coupled receptor-like | H: Family A G protein-coupled receptor-like | T: Aminotran_3 | F: | ECOD (20:10:01) | |
| X [auth p] | e7vblp1 | A: Family A G protein-coupled receptor-like | X: Family A G protein-coupled receptor-like | H: Family A G protein-coupled receptor-like | T: Aminotran_3 | F: | ECOD (20:10:01) | |
| V [auth n] | e7vbln1 | A: Family A G protein-coupled receptor-like | X: Family A G protein-coupled receptor-like | H: Family A G protein-coupled receptor-like | T: Aminotran_3 | F: | ECOD (20:10:01) | |
| U [auth m] | e7vblm1 | A: Family A G protein-coupled receptor-like | X: Family A G protein-coupled receptor-like | H: Family A G protein-coupled receptor-like | T: Aminotran_3 | F: | ECOD (20:10:01) | |
| T [auth l] | e7vbll1 | A: Family A G protein-coupled receptor-like | X: Family A G protein-coupled receptor-like | H: Family A G protein-coupled receptor-like | T: Aminotran_3 | F: | ECOD (20:10:01) | |
| B [auth S] | e7vblS1 | A: Family A G protein-coupled receptor-like | X: Family A G protein-coupled receptor-like | H: Family A G protein-coupled receptor-like | T: Aminotran_3 | F: | ECOD (20:10:01) | |
| S [auth k] | e7vblk1 | A: Family A G protein-coupled receptor-like | X: Family A G protein-coupled receptor-like | H: Family A G protein-coupled receptor-like | T: Aminotran_3 | F: | ECOD (20:10:01) | |
| R [auth j] | e7vblj1 | A: Family A G protein-coupled receptor-like | X: Family A G protein-coupled receptor-like | H: Family A G protein-coupled receptor-like | T: Aminotran_3 | F: | ECOD (20:10:01) | |
| Q [auth i] | e7vbli1 | A: Family A G protein-coupled receptor-like | X: Family A G protein-coupled receptor-like | H: Family A G protein-coupled receptor-like | T: Aminotran_3 | F: | ECOD (20:10:01) | |
| P [auth h] | e7vblh1 | A: Family A G protein-coupled receptor-like | X: Family A G protein-coupled receptor-like | H: Family A G protein-coupled receptor-like | T: Aminotran_3 | F: | ECOD (20:10:01) | |
| O [auth g] | e7vblg1 | A: Family A G protein-coupled receptor-like | X: Family A G protein-coupled receptor-like | H: Family A G protein-coupled receptor-like | T: Aminotran_3 | F: | ECOD (20:10:01) | |
| N [auth f] | e7vblf1 | A: Family A G protein-coupled receptor-like | X: Family A G protein-coupled receptor-like | H: Family A G protein-coupled receptor-like | T: Aminotran_3 | F: | ECOD (20:10:01) | |
| L [auth d] | e7vbld1 | A: Family A G protein-coupled receptor-like | X: Family A G protein-coupled receptor-like | H: Family A G protein-coupled receptor-like | T: Aminotran_3 | F: | ECOD (20:10:01) |
Domain Annotation: CATH CATH Database Homepage
| Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
|---|---|---|---|---|---|---|
| F [auth X] | 1.10.1200.10 | Mainly Alpha | Orthogonal Bundle | Non-ribosomal Peptide Synthetase Peptidyl Carrier Protein | Chain A | CATH (utative) |
| S [auth k] | 1.10.287.3510 | Mainly Alpha | Orthogonal Bundle | Helix Hairpins | CATH (utative) | |
| R [auth j] | 1.20.58.1610 | Mainly Alpha | Up-down Bundle | Methane Monooxygenase Hydroxylase | Chain G, domain 1 | CATH (utative) |
Protein Family Annotation Pfam Database Homepage
| Chains | Accession | Name | Description | Comments | Source |
|---|---|---|---|---|---|
| H [auth Z] | PF08122 | NADH-ubiquinone oxidoreductase B12 subunit family (NDUF_B12) | NADH-ubiquinone oxidoreductase B12 subunit family | - | Family |
| G [auth Y] | PF14813 | NADH dehydrogenase 1 beta subcomplex subunit 2 (NADH_B2) | NADH dehydrogenase 1 beta subcomplex subunit 2 | - | Family |
| F [auth X] | PF00550 | Phosphopantetheine attachment site (PP-binding) | Phosphopantetheine attachment site | A 4'-phosphopantetheine prosthetic group is attached through a serine. This prosthetic group acts as a a 'swinging arm' for the attachment of activated fatty acid and amino-acid groups. This domain forms a four helix bundle. This family includes memb ... | Domain |
| E [auth W] | PF01712 | Deoxynucleoside kinase (dNK) | Deoxynucleoside kinase | This family consists of various deoxynucleoside kinases cytidine EC:2.7.1.74, guanosine EC:2.7.1.113, adenosine EC:2.7.1.76 and thymidine kinase EC:2.7.1.21 (which also phosphorylates deoxyuridine and deoxycytosine.) These enzymes catalyse the prod ... | Domain |
| E [auth W] | PF06212 | GRIM-19 protein (GRIM-19) | GRIM-19 protein | - | Family |
| D [auth V] | PF05676 | NADH-ubiquinone oxidoreductase B18 subunit (NDUFB7) (NDUF_B7) | NADH-ubiquinone oxidoreductase B18 subunit (NDUFB7) | - | Family |
| D [auth V] | PF02466 | Tim17/Tim22/Tim23/Pmp24 family (Tim17) | Tim17/Tim22/Tim23/Pmp24 family | - | Family |
| C [auth U] | PF06747 | CHCH domain (CHCH) | CHCH domain | we have identified a conserved motif in the LOC118487 protein that we have called the CHCH motif. Alignment of this protein with related members showed the presence of three subgroups of proteins, which are called the S (Small), N (N-terminal extende ... | Domain |
| C [auth U] | PF14987 | NADH dehydrogenase 1 alpha subcomplex subunit 3 (NADHdh_A3) | NADH dehydrogenase 1 alpha subcomplex subunit 3 | - | Family |
| B [auth S] | PF15879 | NADH-ubiquinone oxidoreductase MWFE subunit (MWFE) | NADH-ubiquinone oxidoreductase MWFE subunit | - | Family |
| B [auth S] | PF00146 | NADH dehydrogenase (NADHdh) | NADH dehydrogenase | - | Family |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Membrane Protein Annotation: OPM OPM Database Homepage
| Chains | External Link | Type | Class | Superfamily | Family |
|---|---|---|---|---|---|
| OPM | Transmembrane | Alpha-helical polytopic | Electron transport chain complex I (NADH dehydrogenase) and supercomplexes | H+ or Na+ translocating NADH dehydrogenase |
Membrane Protein Annotation: PDBTM PDBTM Database Homepage
| Chains | External Link | Comment |
|---|---|---|
| PDBTM | Annotated as membrane protein by PDBTM |














