7VCM

crystal structure of GINKO1

External Resource: Annotation


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
ASCOP2B SuperfamilyLysM domain-like 8092167 3001938 SCOP2B (2022-06-29)
ASCOP2B SuperfamilyGFP-like 8096046 3000576 SCOP2B (2022-06-29)
ASCOP2B SuperfamilyBON domain-like 8092168 3002566 SCOP2B (2022-06-29)
BSCOP2B SuperfamilyLysM domain-like 8092167 3001938 SCOP2B (2022-06-29)
BSCOP2B SuperfamilyGFP-like 8096046 3000576 SCOP2B (2022-06-29)
BSCOP2B SuperfamilyBON domain-like 8092168 3002566 SCOP2B (2022-06-29)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A, B
PF01353Green fluorescent protein (GFP)Green fluorescent proteinDomain
A, B
PF01476LysM domain (LysM)LysM domainThe LysM (lysin motif) domain is about 40 residues long. It is found in a variety of enzymes involved in bacterial cell wall degradation [1]. This domain may have a general peptidoglycan binding function. The structure of this domain is known [2]. Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A, B
Green fluorescent protein,Potassium binding protein Kbp,Green fluorescent protein

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A, B
IPR007055BON domainDomain
A, B
IPR036779LysM domain superfamilyHomologous Superfamily
A, B
IPR052196Bacterial Potassium BindingFamily
A, B
IPR014004Transport-associated and nodulation domain, bacteriaDomain
A, B
IPR018392LysM domainDomain
A, B
IPR000786Green fluorescent protein, GFPFamily
A, B
IPR011584Green fluorescent protein-relatedFamily
A, B
IPR009017Green fluorescent proteinHomologous Superfamily