8APN | pdb_00008apn

Structure of the mitochondrial ribosome from Polytomella magna with tRNA bound to the P site

External Resource: Annotation

Domain Annotation: ECOD Classification

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
BC [auth Bq]	Ribosomal_L27A, Ribosomal_L18	e8apnBq1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: Ribosomal_L27A, Ribosomal_L18	ECOD (v295)
LC [auth BA]	Ribosomal_L27A, Ribosomal_L18	e8apnBA1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: Ribosomal_L27A, Ribosomal_L18	ECOD (v295)
HC [auth Bw]	Ribosomal_L27A, Ribosomal_L18	e8apnBw1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: Ribosomal_L27A, Ribosomal_L18	ECOD (v295)
GC [auth Bv]	F5_F8_type_C	e8apnBv1	A: alpha arrays	X: cradle loop barrel	H: Cytochrome P450	T: Cytochrome P450	F: F5_F8_type_C	ECOD (v295)
FC [auth Bu]	Ribosomal_L27A, Ribosomal_L18	e8apnBu1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: Ribosomal_L27A, Ribosomal_L18	ECOD (v295)
EC [auth Bt]	F5_F8_type_C	e8apnBt1	A: alpha arrays	X: cradle loop barrel	H: Cytochrome P450	T: Cytochrome P450	F: F5_F8_type_C	ECOD (v295)
DC [auth Bs]	F5_F8_type_C	e8apnBs1	A: alpha arrays	X: cradle loop barrel	H: Cytochrome P450	T: Cytochrome P450	F: F5_F8_type_C	ECOD (v295)
CC [auth Br]	Ribosomal_L27A, Ribosomal_L18	e8apnBr1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: Ribosomal_L27A, Ribosomal_L18	ECOD (v295)
AC [auth Bp]	Ribosomal_L27A, Ribosomal_L18	e8apnBp1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: Ribosomal_L27A, Ribosomal_L18	ECOD (v295)
YB [auth Bn]	F5_F8_type_C	e8apnBn1	A: alpha arrays	X: cradle loop barrel	H: Cytochrome P450	T: Cytochrome P450	F: F5_F8_type_C	ECOD (v295)
XB [auth Bm]	F5_F8_type_C	e8apnBm1	A: alpha arrays	X: cradle loop barrel	H: Cytochrome P450	T: Cytochrome P450	F: F5_F8_type_C	ECOD (v295)
WB [auth Bl]	F5_F8_type_C	e8apnBl1	A: alpha arrays	X: cradle loop barrel	H: Cytochrome P450	T: Cytochrome P450	F: F5_F8_type_C	ECOD (v295)
VB [auth Bk]	F5_F8_type_C	e8apnBk1	A: alpha arrays	X: cradle loop barrel	H: Cytochrome P450	T: Cytochrome P450	F: F5_F8_type_C	ECOD (v295)
TB [auth Bi]	Ribosomal_L27A, Ribosomal_L18	e8apnBi1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: Ribosomal_L27A, Ribosomal_L18	ECOD (v295)
RB [auth Bg]	F5_F8_type_C	e8apnBg1	A: alpha arrays	X: cradle loop barrel	H: Cytochrome P450	T: Cytochrome P450	F: F5_F8_type_C	ECOD (v295)
QB [auth Bf]	F5_F8_type_C	e8apnBf1	A: alpha arrays	X: cradle loop barrel	H: Cytochrome P450	T: Cytochrome P450	F: F5_F8_type_C	ECOD (v295)
PB [auth Be]	Ribosomal_L27A, Ribosomal_L18	e8apnBe1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: Ribosomal_L27A, Ribosomal_L18	ECOD (v295)
OB [auth Bd]	Ribosomal_L27A, Ribosomal_L18	e8apnBd1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: Ribosomal_L27A, Ribosomal_L18	ECOD (v295)
NB [auth Bc]	Ribosomal_L27A, Ribosomal_L18	e8apnBc1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: Ribosomal_L27A, Ribosomal_L18	ECOD (v295)
MB [auth Bb]	F5_F8_type_C	e8apnBb1	A: alpha arrays	X: cradle loop barrel	H: Cytochrome P450	T: Cytochrome P450	F: F5_F8_type_C	ECOD (v295)
LB [auth Ba]	Ribosomal_L27A, Ribosomal_L18	e8apnBa1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: Ribosomal_L27A, Ribosomal_L18	ECOD (v295)
PA [auth AH]	Ribosomal_L27A, Ribosomal_L18	e8apnAH1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: Ribosomal_L27A, Ribosomal_L18	ECOD (v295)
OA [auth AG]	F5_F8_type_C	e8apnAG1	A: alpha arrays	X: cradle loop barrel	H: Cytochrome P450	T: Cytochrome P450	F: F5_F8_type_C	ECOD (v295)
NA [auth AF]	Ribosomal_L27A, Ribosomal_L18	e8apnAF1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: Ribosomal_L27A, Ribosomal_L18	ECOD (v295)
MA [auth AE]	F5_F8_type_C	e8apnAE1	A: alpha arrays	X: cradle loop barrel	H: Cytochrome P450	T: Cytochrome P450	F: F5_F8_type_C	ECOD (v295)
LA [auth AD]	F5_F8_type_C	e8apnAD1	A: alpha arrays	X: cradle loop barrel	H: Cytochrome P450	T: Cytochrome P450	F: F5_F8_type_C	ECOD (v295)
JA [auth AB]	F5_F8_type_C	e8apnAB1	A: alpha arrays	X: cradle loop barrel	H: Cytochrome P450	T: Cytochrome P450	F: F5_F8_type_C	ECOD (v295)
IA [auth AA]	F5_F8_type_C	e8apnAA1	A: alpha arrays	X: cradle loop barrel	H: Cytochrome P450	T: Cytochrome P450	F: F5_F8_type_C	ECOD (v295)
HA [auth Az]	F5_F8_type_C	e8apnAz1	A: alpha arrays	X: cradle loop barrel	H: Cytochrome P450	T: Cytochrome P450	F: F5_F8_type_C	ECOD (v295)
EA [auth Aw]	F5_F8_type_C	e8apnAw1	A: alpha arrays	X: cradle loop barrel	H: Cytochrome P450	T: Cytochrome P450	F: F5_F8_type_C	ECOD (v295)
DA [auth Av]	F5_F8_type_C	e8apnAv1	A: alpha arrays	X: cradle loop barrel	H: Cytochrome P450	T: Cytochrome P450	F: F5_F8_type_C	ECOD (v295)
CA [auth Au]	Ribosomal_L27A, Ribosomal_L18	e8apnAu1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: Ribosomal_L27A, Ribosomal_L18	ECOD (v295)
BA [auth At]	Ribosomal_L27A, Ribosomal_L18	e8apnAt1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: Ribosomal_L27A, Ribosomal_L18	ECOD (v295)
AA [auth As]	Ribosomal_L27A, Ribosomal_L18	e8apnAs1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: Ribosomal_L27A, Ribosomal_L18	ECOD (v295)
Z [auth Ar]	Ribosomal_L27A, Ribosomal_L18	e8apnAr1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: Ribosomal_L27A, Ribosomal_L18	ECOD (v295)
Y [auth Aq]	Ribosomal_L27A, Ribosomal_L18	e8apnAq1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: Ribosomal_L27A, Ribosomal_L18	ECOD (v295)
X [auth Ap]	Ribosomal_L27A, Ribosomal_L18	e8apnAp1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: Ribosomal_L27A, Ribosomal_L18	ECOD (v295)
W [auth Ao]	F5_F8_type_C	e8apnAo1	A: alpha arrays	X: cradle loop barrel	H: Cytochrome P450	T: Cytochrome P450	F: F5_F8_type_C	ECOD (v295)
V [auth An]	Ribosomal_L27A, Ribosomal_L18	e8apnAn1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: Ribosomal_L27A, Ribosomal_L18	ECOD (v295)
T [auth Al]	Ribosomal_L27A, Ribosomal_L18	e8apnAl1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: Ribosomal_L27A, Ribosomal_L18	ECOD (v295)
S [auth Ak]	Ribosomal_L27A, Ribosomal_L18	e8apnAk1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: Ribosomal_L27A, Ribosomal_L18	ECOD (v295)
R [auth Aj]	Ribosomal_L27A, Ribosomal_L18	e8apnAj1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: Ribosomal_L27A, Ribosomal_L18	ECOD (v295)
Q [auth Ai]	F5_F8_type_C	e8apnAi1	A: alpha arrays	X: cradle loop barrel	H: Cytochrome P450	T: Cytochrome P450	F: F5_F8_type_C	ECOD (v295)
P [auth Ah]	Ribosomal_L27A, Ribosomal_L18	e8apnAh1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: Ribosomal_L27A, Ribosomal_L18	ECOD (v295)
O [auth Af]	F5_F8_type_C	e8apnAf1	A: alpha arrays	X: cradle loop barrel	H: Cytochrome P450	T: Cytochrome P450	F: F5_F8_type_C	ECOD (v295)
N [auth Ae]	Ribosomal_L27A, Ribosomal_L18	e8apnAe1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: Ribosomal_L27A, Ribosomal_L18	ECOD (v295)
M [auth Ad]	F5_F8_type_C	e8apnAd1	A: alpha arrays	X: cradle loop barrel	H: Cytochrome P450	T: Cytochrome P450	F: F5_F8_type_C	ECOD (v295)
L [auth Ac]	Ribosomal_L27A, Ribosomal_L18	e8apnAc1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: Ribosomal_L27A, Ribosomal_L18	ECOD (v295)
K [auth Ab]	Ribosomal_L27A, Ribosomal_L18	e8apnAb1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: Ribosomal_L27A, Ribosomal_L18	ECOD (v295)
J [auth Aa]	F5_F8_type_C	e8apnAa1	A: alpha arrays	X: cradle loop barrel	H: Cytochrome P450	T: Cytochrome P450	F: F5_F8_type_C	ECOD (v295)

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RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.