8AY1 | pdb_00008ay1

Crystal structure of the C. elegans POFUT2 (CePoFUT2) triple mutant (R298K-R299K-A418C) in complex with the Rattus norvegicus TSR4 single mutant (E10C) from F-spondin

External Resource: Annotation

Domain Annotation: ECOD Classification
Domain Annotation: CATH
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
B	F5_F8_type_C	e8ay1B1	A: a/b three-layered sandwiches	X: RNase A-like	H: Cytochrome P450	T: Cytochrome P450	F: F5_F8_type_C	ECOD (v294.1)
A	F5_F8_type_C	e8ay1A1	A: a/b three-layered sandwiches	X: RNase A-like	H: Cytochrome P450	T: Cytochrome P450	F: F5_F8_type_C	ECOD (v294.1)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
B	3.40.50.11340	Alpha Beta	3-Layer(aba) Sandwich	Rossmann fold		CATH (utative)
B	3.40.50.11350	Alpha Beta	3-Layer(aba) Sandwich	Rossmann fold		CATH (utative)
A	3.40.50.11340	Alpha Beta	3-Layer(aba) Sandwich	Rossmann fold		CATH (utative)
A	3.40.50.11350	Alpha Beta	3-Layer(aba) Sandwich	Rossmann fold		CATH (utative)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A, B	PF00090	Thrombospondin type 1 domain (TSP_1)	Thrombospondin type 1 domain		Domain
A, B	PF10250	GDP-fucose protein O-fucosyltransferase (O-FucT)	GDP-fucose protein O-fucosyltransferase	-	Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B	GDP-fucose protein O-fucosyltransferase 2,Spondin-1	protein binding binding LBD domain binding protein domain specific binding cation binding ion binding metal ion binding small molecule binding fucosyltransferase activity peptide-O-fucosyltransferase activity catalytic activity, acting on a protein glycosyltransferase activity transferase activity hexosyltransferase activity protein binding binding LBD domain binding protein domain specific binding cation binding ion binding metal ion binding small molecule binding fucosyltransferase activity peptide-O-fucosyltransferase activity catalytic activity, acting on a protein glycosyltransferase activity transferase activity hexosyltransferase activity catalytic activity	amyloid precursor protein catabolic process regulation of biological process regulation of cellular process positive regulation of protein metabolic process regulation of protein metabolic process biological regulation positive regulation of biological process primary metabolic process regulation of amyloid precursor protein catabolic process regulation of macromolecule metabolic process regulation of primary metabolic process positive regulation of metabolic process metabolic process cellular process amyloid precursor protein catabolic process regulation of biological process regulation of cellular process positive regulation of protein metabolic process regulation of protein metabolic process biological regulation positive regulation of biological process primary metabolic process regulation of amyloid precursor protein catabolic process regulation of macromolecule metabolic process regulation of primary metabolic process positive regulation of metabolic process metabolic process cellular process positive regulation of macromolecule metabolic process protein metabolic process macromolecule metabolic process positive regulation of amyloid precursor protein catabolic process amyloid precursor protein metabolic process regulation of metabolic process positive regulation of cellular process regulation of amyloid-beta formation negative regulation of biological process negative regulation of amyloid precursor protein catabolic process amyloid-beta metabolic process negative regulation of cellular process negative regulation of protein metabolic process amyloid-beta formation negative regulation of macromolecule metabolic process negative regulation of amyloid-beta formation negative regulation of metabolic process cell adhesion regulation of protein maturation positive regulation of protein maturation positive regulation of macromolecule biosynthetic process positive regulation of protein processing protein maturation regulation of proteolysis positive regulation of biosynthetic process proteolysis regulation of biosynthetic process gene expression macromolecule biosynthetic process regulation of gene expression biosynthetic process positive regulation of gene expression positive regulation of proteolysis regulation of protein processing protein processing regulation of macromolecule biosynthetic process monosaccharide metabolic process carbohydrate metabolic process hexose metabolic process small molecule metabolic process fucose metabolic process carbohydrate derivative biosynthetic process protein O-linked glycosylation via fucose glycoprotein biosynthetic process carbohydrate derivative metabolic process glycoprotein metabolic process protein O-linked glycosylation	cell periphery extracellular matrix cellular anatomical structure external encapsulating structure membrane-bounded organelle intracellular organelle intracellular anatomical structure Golgi apparatus organelle cytoplasm intracellular membrane-bounded organelle endomembrane system endoplasmic reticulum

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B	IPR000884	Thrombospondin type-1 (TSP1) repeat	Repeat
A, B	IPR042307	Reeler domain superfamily	Homologous Superfamily
A, B	IPR002861	Reeler domain	Domain
A, B	IPR036383	Thrombospondin type-1 repeat superfamily	Homologous Superfamily
A, B	IPR051418	Spondin/Thrombospondin type-1 domain-containing	Family
A, B	IPR009465	Spondin, N-terminal	Domain
A, B	IPR044004	Spondin-like TSP1 domain	Domain
A, B	IPR038678	Spondin, N-terminal domain superfamily	Homologous Superfamily
A, B	IPR019378	GDP-fucose protein O-fucosyltransferase	Family
A, B	IPR045130	GDP-fucose protein O-fucosyltransferase 2-like	Family

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.