Crystal structure of Bacteroides ovatus CP926 PL17 alginate lyase
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| B | Ku_PK_bind | e8bddB1 | A: alpha bundles | X: RNase A-like | H: RNase A-like | T: RNase A-like | F: Ku_PK_bind | ECOD (develop294) |
| A | V-set | e8bddA1 | A: alpha bundles | X: RNase A-like | H: RNase A-like | T: RNase A-like | F: V-set | ECOD (develop294) |
Domain Annotation: CATH CATH Database Homepage
| Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
|---|---|---|---|---|---|---|
| B | 1.50.10.100 | Mainly Alpha | Alpha/alpha barrel | Glycosyltransferase | Chondroitin AC/alginate lyase | CATH (utative) |
| B | 2.70.98.70 | Mainly Beta | Distorted Sandwich | Beta-galactosidase | Chain A, domain 5 | CATH (utative) |
| A | 1.50.10.100 | Mainly Alpha | Alpha/alpha barrel | Glycosyltransferase | Chondroitin AC/alginate lyase | CATH (utative) |
| A | 2.70.98.70 | Mainly Beta | Distorted Sandwich | Beta-galactosidase | Chain A, domain 5 | CATH (utative) |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
| Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
|---|---|---|---|---|
| Alginate lyase family protein | - |
InterPro: Protein Family Classification InterPro Database Homepage
| Chains | Accession | Name | Type |
|---|---|---|---|
| IPR008397 | Alginate lyase domain | Domain | |
| IPR008929 | Chondroitin AC/alginate lyase | Homologous Superfamily | |
| IPR012480 | Heparinase II/III-like, C-terminal | Domain |
