8D42

Human mitochondrial DNA polymerase gamma ternary complex with GT basepair in editing conformer (composite)


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
BSCOP2B SuperfamilyClass II aaRS and biotin synthetases 8041653 3000058 SCOP2B (2022-06-29)
BSCOP2B SuperfamilyClass II aaRS ABD-related 8041652 3000465 SCOP2B (2022-06-29)
CSCOP2B SuperfamilyClass II aaRS ABD-related 8041652 3000465 SCOP2B (2022-06-29)
CSCOP2B SuperfamilyClass II aaRS and biotin synthetases 8041653 3000058 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
AF_UNCLASSIFIEDe8d42A2 A: alpha arraysX: helical bundle in Bacillus stearothermophilus-like DNA polymerase I (From Topology)H: helical bundle in Bacillus stearothermophilus-like DNA polymerase I (From Topology)T: helical bundle in Bacillus stearothermophilus-like DNA polymerase IF: F_UNCLASSIFIEDECOD (1.6)
AF_UNCLASSIFIEDe8d42A4 A: alpha bundlesX: fingers domain in bacteriophage RB69-like DNA polymerase I (From Topology)H: fingers domain in bacteriophage RB69-like DNA polymerase I (From Topology)T: fingers domain in bacteriophage RB69-like DNA polymerase IF: F_UNCLASSIFIEDECOD (1.6)
AF_UNCLASSIFIEDe8d42A1 A: a+b two layersX: Alpha-beta plaitsH: Adenylyl and guanylyl cyclase catalytic domain-likeT: Adenylyl and guanylyl cyclase catalytic domain-likeF: F_UNCLASSIFIEDECOD (1.6)
AF_UNCLASSIFIEDe8d42A3 A: mixed a+b and a/bX: Ribonuclease H-likeH: Ribonuclease H-like (From Topology)T: Ribonuclease H-likeF: F_UNCLASSIFIEDECOD (1.6)
BF_UNCLASSIFIEDe8d42B2 A: a+b three layersX: Class II aaRS and biotin synthetases (From Topology)H: Class II aaRS and biotin synthetases (From Topology)T: Class II aaRS and biotin synthetasesF: F_UNCLASSIFIEDECOD (1.6)
BF_UNCLASSIFIEDe8d42B1 A: a/b three-layered sandwichesX: Anticodon-binding domain of Class II aaRS (From Topology)H: Anticodon-binding domain of Class II aaRS (From Topology)T: Anticodon-binding domain of Class II aaRSF: F_UNCLASSIFIEDECOD (1.6)
CF_UNCLASSIFIEDe8d42C1 A: a+b three layersX: Class II aaRS and biotin synthetases (From Topology)H: Class II aaRS and biotin synthetases (From Topology)T: Class II aaRS and biotin synthetasesF: F_UNCLASSIFIEDECOD (1.6)
CF_UNCLASSIFIEDe8d42C2 A: a/b three-layered sandwichesX: Anticodon-binding domain of Class II aaRS (From Topology)H: Anticodon-binding domain of Class II aaRS (From Topology)T: Anticodon-binding domain of Class II aaRSF: F_UNCLASSIFIEDECOD (1.6)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
PF18136DNA mitochondrial polymerase exonuclease domain (DNApol_Exo)DNA mitochondrial polymerase exonuclease domainThis domain belongs to human mitochondrial DNA polymerase (Pol-gamma). Pol-gamma has a catalytic subunit, Pol gamma-A, which possesses both polymerase and proofreading exonuclease activities and an accessory subunit, Pol gamma-B, which accelerates po ...This domain belongs to human mitochondrial DNA polymerase (Pol-gamma). Pol-gamma has a catalytic subunit, Pol gamma-A, which possesses both polymerase and proofreading exonuclease activities and an accessory subunit, Pol gamma-B, which accelerates polymerization rate and suppresses exonuclease activity. This domain is the exonuclease domain of the catalytic subunit, Pol gamma-A [1].
Domain
B, C
PF03129Anticodon binding domain (HGTP_anticodon)Anticodon binding domainThis domain is found in histidyl, glycyl, threonyl and prolyl tRNA synthetases [1] it is probably the anticodon binding domain [2].Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
DNA polymerase subunit gamma-1
B, C
DNA polymerase subunit gamma-2, mitochondrial
D [auth P]DNA (5'-D(P*AP*AP*AP*CP*GP*AP*CP*GP*GP*CP*CP*AP*GP*TP*GP*CP*CP*AP*TP*AP*T)-3')---
E [auth T]DNA (5'-D(P*GP*GP*TP*AP*TP*GP*GP*CP*AP*CP*TP*GP*GP*CP*CP*GP*TP*CP*GP*TP*TP*T)-3')---

Pharos: Disease Associations Pharos Homepage Annotation

ChainsDrug Target  Associated Disease
PharosP54098
B, C
PharosQ9UHN1