8D88 | pdb_00008d88

Structure of Y430F D-ornithine/D-lysine decarboxylase complex with D-lysine


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
ACas_Cas7e8d88A1 A: alpha bundlesX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F: Cas_Cas7ECOD (develop294)
BCas_Cas7e8d88B1 A: alpha bundlesX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F: Cas_Cas7ECOD (develop294)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
A3.20.20.10 Alpha Beta Alpha-Beta Barrel TIM Barrel Alanine racemaseCATH (utative)
B3.20.20.10 Alpha Beta Alpha-Beta Barrel TIM Barrel Alanine racemaseCATH (utative)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A, B
PF02784Pyridoxal-dependent decarboxylase, pyridoxal binding domain (Orn_Arg_deC_N)Pyridoxal-dependent decarboxylase, pyridoxal binding domainThese pyridoxal-dependent decarboxylases acting on ornithine, lysine, arginine and related substrates This domain has a TIM barrel fold. Domain
A, B
PF00278Pyridoxal-dependent decarboxylase, C-terminal sheet domain (Orn_DAP_Arg_deC)Pyridoxal-dependent decarboxylase, C-terminal sheet domainThese pyridoxal-dependent decarboxylases act on ornithine, lysine, arginine and related substrates. Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage