8FYH | pdb_00008fyh

G4 RNA-mediated PRC2 dimer


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
A [auth B]SCOP2B SuperfamilyVEFS box-like 8090819 3002459 SCOP2B (2022-06-29)
G [auth H]SCOP2B SuperfamilyVEFS box-like 8090819 3002459 SCOP2B (2022-06-29)
C [auth D]SCOP2B SuperfamilyWD40 repeat-like 8053350 3001694 SCOP2B (2022-06-29)
I [auth J]SCOP2B SuperfamilyWD40 repeat-like 8053350 3001694 SCOP2B (2022-06-29)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
B [auth C],
H [auth I]
PF00400WD domain, G-beta repeat (WD40)WD domain, G-beta repeat- Repeat
C [auth D],
I [auth J]
PF12265Histone-binding protein RBBP4 or subunit C of CAF1 complex (CAF1C_H4-bd)Histone-binding protein RBBP4 or subunit C of CAF1 complex- Repeat
C [auth D],
I [auth J]
PF00400WD domain, G-beta repeat (WD40)WD domain, G-beta repeat- Repeat
D [auth A],
J [auth G]
PF18264CXC domain (preSET_CXC)CXC domainThis domain is found to the N-terminus of the SET domain in the EZH2 protein [1]. It is a zinc binding domain. Domain
D [auth A],
J [auth G]
PF00856SET domain (SET)SET domain- Family
D [auth A],
J [auth G]
PF11616WD repeat binding protein EZH2 (EZH2_WD-Binding)WD repeat binding protein EZH2- Family
D [auth A],
J [auth G]
PF21358Ezh2, MCSS domain (Ezh2_MCSS)Ezh2, MCSS domainThis entry represents the MCSS domain found in the middle region of the Histone-lysine N-methyltransferase EZH2 [1-5]. It makes contacts with the adjacent SANT domain and the Vefs domain from EED. Additionally, this domain contains a zinc-binding mot ...Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A [auth B],
G [auth H]
Polycomb protein SUZ12
B [auth C],
H [auth I]
Polycomb protein EED
C [auth D],
I [auth J]
Histone-binding protein RBBP4
D [auth A],
J [auth G]
Histone-lysine N-methyltransferase EZH2
E, K
protein Jumonji isoform X3
F, L
Zinc finger protein AEBP2
G4 RNA---

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A [auth B],
G [auth H]
IPR019135Polycomb protein, VEFS-BoxDomain
B [auth C],
H [auth I]
IPR019775WD40 repeat, conserved siteConserved Site
B [auth C],
H [auth I]
IPR036322WD40-repeat-containing domain superfamilyHomologous Superfamily
B [auth C],
H [auth I]
IPR001680WD40 repeatRepeat
B [auth C],
H [auth I]
IPR015943WD40/YVTN repeat-like-containing domain superfamilyHomologous Superfamily
B [auth C],
H [auth I]
IPR051243Polycomb group WD repeat-containing proteinFamily
C [auth D],
I [auth J]
IPR050459WD repeat RBAP46/RBAP48/MSI1Family
C [auth D],
I [auth J]
IPR019775WD40 repeat, conserved siteConserved Site
C [auth D],
I [auth J]
IPR015943WD40/YVTN repeat-like-containing domain superfamilyHomologous Superfamily
C [auth D],
I [auth J]
IPR036322WD40-repeat-containing domain superfamilyHomologous Superfamily
C [auth D],
I [auth J]
IPR022052Histone-binding protein RBBP4-like, N-terminalDomain
C [auth D],
I [auth J]
IPR001680WD40 repeatRepeat
C [auth D],
I [auth J]
IPR020472G-protein beta WD-40 repeatRepeat
D [auth A],
J [auth G]
IPR048358EZH1/2, MCSS domainDomain
D [auth A],
J [auth G]
IPR041343Polycomb repressive complex 2 subunit EZH1/EZH2, tri-helical domainDomain
D [auth A],
J [auth G]
IPR046341SET domain superfamilyHomologous Superfamily
D [auth A],
J [auth G]
IPR001214SET domainDomain
D [auth A],
J [auth G]
IPR045318Histone-lysine N-methyltransferase EZH1/2-likeFamily
D [auth A],
J [auth G]
IPR033467Tesmin/TSO1-like CXC domainDomain
D [auth A],
J [auth G]
IPR044439EZH2, SET domainDomain
D [auth A],
J [auth G]
IPR026489CXC domainDomain
D [auth A],
J [auth G]
IPR041355Pre-SET CXC domainDomain
D [auth A],
J [auth G]
IPR001005SANT/Myb domainDomain
D [auth A],
J [auth G]
IPR021654Histone-lysine N-methyltransferase EZH1/EZH2Family
E, K
IPR003349JmjN domainDomain
E, K
IPR001606ARID DNA-binding domainDomain
E, K
IPR004198Zinc finger, C5HC2-typeDomain
E, K
IPR003347JmjC domainDomain
E, K
IPR036431ARID DNA-binding domain superfamilyHomologous Superfamily
F, L
IPR013087Zinc finger C2H2-typeDomain
F, L
IPR036236Zinc finger C2H2 superfamilyHomologous Superfamily
F, L
IPR052130AEBP2/jing C2H2-type zinc-fingerFamily

Pharos: Disease Associations Pharos Homepage Annotation

ChainsDrug Target  Associated Disease
A [auth B],
G [auth H]
PharosQ15022
B [auth C],
H [auth I]
PharosO75530
C [auth D],
I [auth J]
PharosQ09028
D [auth A],
J [auth G]
PharosQ15910
F, L
PharosQ6ZN18