Annotations: 8GMU

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
A	SCOP2B Superfamily	LexA/Signal peptidase-like	8058185	3000103	SCOP2B (2022-06-29)
B [auth F]	SCOP2B Superfamily	RecA C-terminal domain-like	8056608	3000958	SCOP2B (2022-06-29)
B [auth F]	SCOP2B Superfamily	RecA-like P-loop NTPases	8018145	3002019	SCOP2B (2022-06-29)
C [auth G]	SCOP2B Superfamily	RecA C-terminal domain-like	8056608	3000958	SCOP2B (2022-06-29)
C [auth G]	SCOP2B Superfamily	RecA-like P-loop NTPases	8018145	3002019	SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
A	Peptidase_S24	e8gmuA1	A: beta barrels	X: SH3	H: LexA/Signal peptidase (From Topology)	T: LexA/Signal peptidase	F: Peptidase_S24	ECOD (1.6)
B [auth F]	recA	e8gmuF1	A: a+b two layers	X: Anti-LPS factor/recA domain (From Topology)	H: Anti-LPS factor/recA domain (From Topology)	T: Anti-LPS factor/recA domain	F: recA	ECOD (1.6)
B [auth F]	RecA	e8gmuF2	A: a/b three-layered sandwiches	X: P-loop domains-like	H: P-loop domains-related	T: P-loop containing nucleoside triphosphate hydrolases	F: RecA	ECOD (1.6)
C [auth G]	recA	e8gmuG1	A: a+b two layers	X: Anti-LPS factor/recA domain (From Topology)	H: Anti-LPS factor/recA domain (From Topology)	T: Anti-LPS factor/recA domain	F: recA	ECOD (1.6)
C [auth G]	RecA	e8gmuG2	A: a/b three-layered sandwiches	X: P-loop domains-like	H: P-loop domains-related	T: P-loop containing nucleoside triphosphate hydrolases	F: RecA	ECOD (1.6)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A	PF00717	Peptidase S24-like (Peptidase_S24)	Peptidase S24-like		Domain
B [auth F], C [auth G]	PF21096	RecA C-terminal domain (RecA_C)	RecA C-terminal domain	This entry represents a small domain found at the C-terminus of RecA. The recA gene product is a multifunctional enzyme that plays a role in homologous recombination, DNA repair and induction of the SOS response This domain adopts a structure compose ...	This entry represents a small domain found at the C-terminus of RecA. The recA gene product is a multifunctional enzyme that plays a role in homologous recombination, DNA repair and induction of the SOS response This domain adopts a structure composed of a beta hairpin and three alpha helices. It has been shown to bind to dsDNA [1].	Domain
B [auth F], C [auth G]	PF00154	recA bacterial DNA recombination protein (RecA)	recA bacterial DNA recombination protein	-	Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A	Repressor protein cI	DNA binding sequence-specific DNA binding sequence-specific double-stranded DNA binding transcription cis-regulatory region binding binding double-stranded DNA binding core promoter sequence-specific DNA binding nucleic acid binding transcription regulatory region nucleic acid binding identical protein binding protein binding	latent virus replication viral process viral latency release from viral latency latency-replication decision regulation of cellular process negative regulation of biological process RNA metabolic process regulation of primary metabolic process negative regulation of RNA biosynthetic process RNA biosynthetic process nucleobase-containing compound metabolic process DNA-templated transcription nucleic acid biosynthetic process latent virus replication viral process viral latency release from viral latency latency-replication decision regulation of cellular process negative regulation of biological process RNA metabolic process regulation of primary metabolic process negative regulation of RNA biosynthetic process RNA biosynthetic process nucleobase-containing compound metabolic process DNA-templated transcription nucleic acid biosynthetic process regulation of RNA metabolic process negative regulation of cellular process negative regulation of nucleobase-containing compound metabolic process regulation of nucleobase-containing compound metabolic process regulation of RNA biosynthetic process negative regulation of macromolecule metabolic process regulation of biosynthetic process negative regulation of DNA-templated transcription regulation of biological process negative regulation of metabolic process biological regulation primary metabolic process regulation of macromolecule metabolic process nucleobase-containing compound biosynthetic process gene expression macromolecule biosynthetic process nucleic acid metabolic process regulation of gene expression biosynthetic process negative regulation of transcription by competitive promoter binding negative regulation of biosynthetic process negative regulation of macromolecule biosynthetic process metabolic process cellular process regulation of macromolecule biosynthetic process macromolecule metabolic process regulation of DNA-templated transcription regulation of metabolic process negative regulation of RNA metabolic process maintenance of viral latency viral gene expression regulation of viral process regulation of viral transcription positive regulation of viral process positive regulation of biological process viral transcription positive regulation of viral transcription	-
B [auth F], C [auth G]	Protein RecA	ATP-dependent activity, acting on DNA catalytic activity, acting on DNA catalytic activity, acting on a nucleic acid catalytic activity ATP-dependent activity DNA binding binding damaged DNA binding nucleic acid binding DNA damage sensor activity molecular sensor activity ATP-dependent DNA damage sensor activity molecular function regulator activity adenyl ribonucleotide binding ATP-dependent activity, acting on DNA catalytic activity, acting on DNA catalytic activity, acting on a nucleic acid catalytic activity ATP-dependent activity DNA binding binding damaged DNA binding nucleic acid binding DNA damage sensor activity molecular sensor activity ATP-dependent DNA damage sensor activity molecular function regulator activity adenyl ribonucleotide binding nucleotide binding purine ribonucleotide binding purine ribonucleoside triphosphate binding nucleoside phosphate binding ion binding purine nucleotide binding anion binding adenyl nucleotide binding ATP binding heterocyclic compound binding carbohydrate derivative binding ribonucleotide binding small molecule binding transcription factor binding protein binding DNA-binding transcription factor binding pyrophosphatase activity ATP hydrolysis activity ribonucleoside triphosphate phosphatase activity hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides hydrolase activity hydrolase activity, acting on acid anhydrides single-stranded DNA binding	cellular response to stimulus cellular response to stress response to stimulus DNA damage response response to stress cellular process SOS response translesion synthesis postreplication repair primary metabolic process DNA metabolic process nucleobase-containing compound biosynthetic process DNA synthesis involved in DNA repair macromolecule biosynthetic process cellular response to stimulus cellular response to stress response to stimulus DNA damage response response to stress cellular process SOS response translesion synthesis postreplication repair primary metabolic process DNA metabolic process nucleobase-containing compound biosynthetic process DNA synthesis involved in DNA repair macromolecule biosynthetic process nucleic acid metabolic process nucleobase-containing compound metabolic process nucleic acid biosynthetic process biosynthetic process metabolic process macromolecule metabolic process DNA biosynthetic process DNA repair homologous recombination DNA recombination response to ionizing radiation response to radiation response to abiotic stimulus recombinational repair cell motility	cellular anatomical structure intracellular anatomical structure cytoplasm transferase complex, transferring phosphorus-containing groups DNA polymerase V complex protein-containing complex catalytic complex transferase complex DNA polymerase complex intracellular protein-containing complex
D [auth S]	DNA (5'-D(PTPTPTPTPTPT)-3')	-	-	-

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A	IPR015927	Peptidase S24/S26A/S26B/S26C	Domain
A	IPR001387	Cro/C1-type helix-turn-helix domain	Domain
A	IPR039418	LexA-like	Domain
A	IPR036286	LexA/Signal peptidase-like superfamily	Homologous Superfamily
A	IPR050077	LexA repressor	Family
A	IPR010982	Lambda repressor-like, DNA-binding domain superfamily	Homologous Superfamily
B [auth F], C [auth G]	IPR049261	RecA-like, C-terminal	Domain
B [auth F], C [auth G]	IPR020587	DNA recombination and repair protein RecA, monomer-monomer interface	Domain
B [auth F], C [auth G]	IPR003593	AAA+ ATPase domain	Domain
B [auth F], C [auth G]	IPR020584	DNA recombination/repair protein RecA, conserved site	Conserved Site
B [auth F], C [auth G]	IPR023400	DNA recombination and repair protein RecA, C-terminal, superfamily	Homologous Superfamily
B [auth F], C [auth G]	IPR027417	P-loop containing nucleoside triphosphate hydrolase	Homologous Superfamily
B [auth F], C [auth G]	IPR020588	DNA recombination and repair protein RecA-like, ATP-binding domain	Domain
B [auth F], C [auth G]	IPR049428	RecA-like, N-terminal	Domain
B [auth F], C [auth G]	IPR013765	DNA recombination and repair protein RecA	Family

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.