8TV9 | pdb_00008tv9

Inner Mat-T4P complex

External Resource: Annotation

Domain Annotation: ECOD Classification
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
S [auth AR]	CoV_NSP10	e8tv9AR1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: CoV_NSP10	ECOD (v295)
R [auth AQ]	CoV_NSP10	e8tv9AQ1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: CoV_NSP10	ECOD (v295)
Q [auth AP]	CoV_NSP10	e8tv9AP1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: CoV_NSP10	ECOD (v295)
P [auth AO]	CoV_NSP10	e8tv9AO1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: CoV_NSP10	ECOD (v295)
O [auth AN]	CoV_NSP10	e8tv9AN1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: CoV_NSP10	ECOD (v295)
N [auth AM]	CoV_NSP10	e8tv9AM1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: CoV_NSP10	ECOD (v295)
M [auth AL]	CoV_NSP10	e8tv9AL1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: CoV_NSP10	ECOD (v295)
L [auth AK]	CoV_NSP10	e8tv9AK1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: CoV_NSP10	ECOD (v295)
K [auth AJ]	CoV_NSP10	e8tv9AJ1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: CoV_NSP10	ECOD (v295)
J [auth AI]	CoV_NSP10	e8tv9AI1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: CoV_NSP10	ECOD (v295)
I [auth AH]	CoV_NSP10	e8tv9AH1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: CoV_NSP10	ECOD (v295)
H [auth AG]	CoV_NSP10	e8tv9AG1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: CoV_NSP10	ECOD (v295)
G [auth AF]	CoV_NSP10	e8tv9AF1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: CoV_NSP10	ECOD (v295)
F [auth AE]	CoV_NSP10	e8tv9AE1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: CoV_NSP10	ECOD (v295)
E [auth AD]	CoV_NSP10	e8tv9AD1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: CoV_NSP10	ECOD (v295)
D [auth AC]	CoV_NSP10	e8tv9AC1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: CoV_NSP10	ECOD (v295)
C [auth AB]	CoV_NSP10	e8tv9AB1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: CoV_NSP10	ECOD (v295)
B [auth AA]	CoV_NSP10	e8tv9AA1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: CoV_NSP10	ECOD (v295)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
AA [auth AZ], BA, CA [auth BB], DA [auth BC], EA [auth BD], AA [auth AZ], BA, CA [auth BB], DA [auth BC], EA [auth BD], FA [auth BE], GA [auth BF], HA [auth BG], IA [auth BH], JA [auth BI], KA [auth BJ], T [auth AS], U [auth AT], V [auth AU], W [auth AV], X [auth AW], Y [auth AX], Z [auth AY]	Fimbrial protein	-	protein transport across the cell outer membrane establishment of protein localization transport secretion establishment of protein localization to extracellular region export from cell protein secretion by the type II secretion system protein secretion establishment of localization protein localization to extracellular region transmembrane transport localization secretion by cell protein transmembrane transport protein transport protein transport across the cell outer membrane establishment of protein localization transport secretion establishment of protein localization to extracellular region export from cell protein secretion by the type II secretion system protein secretion establishment of localization protein localization to extracellular region transmembrane transport localization secretion by cell protein transmembrane transport protein transport macromolecule localization cellular process intracellular protein localization cell adhesion	protein-containing complex type II protein secretion system complex pilus cell projection cellular anatomical structure
B [auth AA], C [auth AB], D [auth AC], E [auth AD], F [auth AE], B [auth AA], C [auth AB], D [auth AC], E [auth AD], F [auth AE], G [auth AF], H [auth AG], I [auth AH], J [auth AI], K [auth AJ], L [auth AK], M [auth AL], N [auth AM], O [auth AN], P [auth AO], Q [auth AP], R [auth AQ], S [auth AR]	Fimbrial protein	-	protein transport across the cell outer membrane establishment of protein localization transport secretion establishment of protein localization to extracellular region export from cell protein secretion by the type II secretion system protein secretion establishment of localization protein localization to extracellular region transmembrane transport localization secretion by cell protein transmembrane transport protein transport protein transport across the cell outer membrane establishment of protein localization transport secretion establishment of protein localization to extracellular region export from cell protein secretion by the type II secretion system protein secretion establishment of localization protein localization to extracellular region transmembrane transport localization secretion by cell protein transmembrane transport protein transport macromolecule localization cellular process intracellular protein localization cell adhesion	protein-containing complex type II protein secretion system complex pilus cell projection cellular anatomical structure
A [auth a]	Maturation protein	-	virion attachment to host cell biological process involved in interspecies interaction between organisms adhesion of symbiont to host cell viral life cycle adhesion of symbiont to host biological process involved in interaction with host biological process involved in symbiotic interaction virion attachment to host cell pilus symbiont entry into host cell viral process symbiont entry into host	virion component

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
AA [auth AZ], BA, CA [auth BB], DA [auth BC], EA [auth BD], AA [auth AZ], BA, CA [auth BB], DA [auth BC], EA [auth BD], FA [auth BE], GA [auth BF], HA [auth BG], IA [auth BH], JA [auth BI], KA [auth BJ], T [auth AS], U [auth AT], V [auth AU], W [auth AV], X [auth AW], Y [auth AX], Z [auth AY]	IPR000983	General secretion pathway protein G-type pilin	Family
AA [auth AZ], BA, CA [auth BB], DA [auth BC], EA [auth BD], AA [auth AZ], BA, CA [auth BB], DA [auth BC], EA [auth BD], FA [auth BE], GA [auth BF], HA [auth BG], IA [auth BH], JA [auth BI], KA [auth BJ], T [auth AS], U [auth AT], V [auth AU], W [auth AV], X [auth AW], Y [auth AX], Z [auth AY]	IPR012902	Prokaryotic N-terminal methylation site	PTM
AA [auth AZ], BA, CA [auth BB], DA [auth BC], EA [auth BD], AA [auth AZ], BA, CA [auth BB], DA [auth BC], EA [auth BD], FA [auth BE], GA [auth BF], HA [auth BG], IA [auth BH], JA [auth BI], KA [auth BJ], T [auth AS], U [auth AT], V [auth AU], W [auth AV], X [auth AW], Y [auth AX], Z [auth AY]	IPR001082	Fimbrial protein pilin	Family
AA [auth AZ], BA, CA [auth BB], DA [auth BC], EA [auth BD], AA [auth AZ], BA, CA [auth BB], DA [auth BC], EA [auth BD], FA [auth BE], GA [auth BF], HA [auth BG], IA [auth BH], JA [auth BI], KA [auth BJ], T [auth AS], U [auth AT], V [auth AU], W [auth AV], X [auth AW], Y [auth AX], Z [auth AY]	IPR045584	Pilin-like	Homologous Superfamily
B [auth AA], C [auth AB], D [auth AC], E [auth AD], F [auth AE], B [auth AA], C [auth AB], D [auth AC], E [auth AD], F [auth AE], G [auth AF], H [auth AG], I [auth AH], J [auth AI], K [auth AJ], L [auth AK], M [auth AL], N [auth AM], O [auth AN], P [auth AO], Q [auth AP], R [auth AQ], S [auth AR]	IPR000983	General secretion pathway protein G-type pilin	Family
B [auth AA], C [auth AB], D [auth AC], E [auth AD], F [auth AE], B [auth AA], C [auth AB], D [auth AC], E [auth AD], F [auth AE], G [auth AF], H [auth AG], I [auth AH], J [auth AI], K [auth AJ], L [auth AK], M [auth AL], N [auth AM], O [auth AN], P [auth AO], Q [auth AP], R [auth AQ], S [auth AR]	IPR012902	Prokaryotic N-terminal methylation site	PTM
B [auth AA], C [auth AB], D [auth AC], E [auth AD], F [auth AE], B [auth AA], C [auth AB], D [auth AC], E [auth AD], F [auth AE], G [auth AF], H [auth AG], I [auth AH], J [auth AI], K [auth AJ], L [auth AK], M [auth AL], N [auth AM], O [auth AN], P [auth AO], Q [auth AP], R [auth AQ], S [auth AR]	IPR001082	Fimbrial protein pilin	Family
B [auth AA], C [auth AB], D [auth AC], E [auth AD], F [auth AE], B [auth AA], C [auth AB], D [auth AC], E [auth AD], F [auth AE], G [auth AF], H [auth AG], I [auth AH], J [auth AI], K [auth AJ], L [auth AK], M [auth AL], N [auth AM], O [auth AN], P [auth AO], Q [auth AP], R [auth AQ], S [auth AR]	IPR045584	Pilin-like	Homologous Superfamily
A [auth a]	IPR005563	Assembly protein	Family

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RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.