Annotations: 8VHY

Neutron Structure of Reduced Trp161Phe MnSOD

External Resource: Annotation

Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification
Pharos: Disease Associations

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
B	SCOP2B Superfamily	Fe, Mn superoxide dismutase (SOD), N-terminal domain	8033670	3000794	SCOP2B (2022-06-29)
B	SCOP2B Superfamily	Fe, Mn superoxide dismutase (SOD), C-terminal domain	8033672	3000916	SCOP2B (2022-06-29)
A	SCOP2B Superfamily	Fe, Mn superoxide dismutase (SOD), N-terminal domain	8033670	3000794	SCOP2B (2022-06-29)
A	SCOP2B Superfamily	Fe, Mn superoxide dismutase (SOD), C-terminal domain	8033672	3000916	SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
B	V-set	e8vhyB1	A: alpha arrays	X: Hypothetical protein YqbG-like	H: Hypothetical protein YqbG-like	T: alpha/beta-Hydrolases	F: V-set	ECOD (v295.2)
A	V-set	e8vhyA1	A: alpha arrays	X: Hypothetical protein YqbG-like	H: Hypothetical protein YqbG-like	T: alpha/beta-Hydrolases	F: V-set	ECOD (v295.2)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A, B	PF00081	Iron/manganese superoxide dismutases, alpha-hairpin domain (Sod_Fe_N)	Iron/manganese superoxide dismutases, alpha-hairpin domain	superoxide dismutases (SODs) catalyse the conversion of superoxide radicals to hydrogen peroxide and molecular oxygen. Three evolutionarily distinct families of SODs are known, of which the Mn/Fe-binding family is one. In humans, there is a cytoplas ...	superoxide dismutases (SODs) catalyse the conversion of superoxide radicals to hydrogen peroxide and molecular oxygen. Three evolutionarily distinct families of SODs are known, of which the Mn/Fe-binding family is one. In humans, there is a cytoplasmic Cu/Zn SOD, and a mitochondrial Mn/Fe SOD. N-terminal domain is a long alpha antiparallel hairpin. A small fragment of YTRE_LEPBI matches well - sequencing error?	Domain
A, B	PF02777	Iron/manganese superoxide dismutases, C-terminal domain (Sod_Fe_C)	Iron/manganese superoxide dismutases, C-terminal domain	superoxide dismutases (SODs) catalyse the conversion of superoxide radicals to hydrogen peroxide and molecular oxygen. Three evolutionarily distinct families of SODs are known, of which the Mn/Fe-binding family is one. In humans, there is a cytoplas ...	superoxide dismutases (SODs) catalyse the conversion of superoxide radicals to hydrogen peroxide and molecular oxygen. Three evolutionarily distinct families of SODs are known, of which the Mn/Fe-binding family is one. In humans, there is a cytoplasmic Cu/Zn SOD, and a mitochondrial Mn/Fe SOD. C-terminal domain is a mixed alpha/beta fold.	Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B	Superoxide dismutase [Mn], mitochondrial	cation binding manganese ion binding transition metal ion binding ion binding binding metal ion binding small molecule binding DNA binding nucleic acid binding identical protein binding protein binding superoxide dismutase activity oxidoreductase activity, acting on superoxide radicals as acceptor oxidoreductase activity cation binding manganese ion binding transition metal ion binding ion binding binding metal ion binding small molecule binding DNA binding nucleic acid binding identical protein binding protein binding superoxide dismutase activity oxidoreductase activity, acting on superoxide radicals as acceptor oxidoreductase activity antioxidant activity catalytic activity oxygen binding enzyme binding	response to stimulus response to chemical response to xenobiotic stimulus multicellular organismal process smooth muscle cell differentiation regulation of cellular process cellular developmental process regulation of developmental process positive regulation of smooth muscle cell differentiation regulation of smooth muscle cell differentiation positive regulation of biological process regulation of cell differentiation muscle cell differentiation muscle structure development response to stimulus response to chemical response to xenobiotic stimulus multicellular organismal process smooth muscle cell differentiation regulation of cellular process cellular developmental process regulation of developmental process positive regulation of smooth muscle cell differentiation regulation of smooth muscle cell differentiation positive regulation of biological process regulation of cell differentiation muscle cell differentiation muscle structure development positive regulation of developmental process multicellular organism development vascular associated smooth muscle cell differentiation positive regulation of cell differentiation cell differentiation anatomical structure development positive regulation of cellular process system development developmental process regulation of biological process positive regulation of vascular associated smooth muscle cell differentiation biological regulation regulation of vascular associated smooth muscle cell differentiation positive regulation of muscle cell differentiation vasculature development circulatory system development regulation of muscle cell differentiation cellular process animal gross anatomical part developmental process system process circulatory system process regulation of blood pressure regulation of biological quality blood circulation response to nutrient levels response to monosaccharide response to carbohydrate response to nutrient response to oxygen-containing compound response to L-ascorbic acid response to vitamin cellular homeostasis chemical homeostasis homeostatic process intracellular oxygen homeostasis intracellular chemical homeostasis response to silicon dioxide cellular response to stimulus response to oxidative stress cellular response to chemical stimulus cellular response to stress response to stress cellular response to oxidative stress cellular response to chemical stress response to electrical stimulus response to abiotic stimulus response to metal ion response to zinc ion response to alcohol cellular response to oxygen-containing compound cellular response to alcohol cellular response to ethanol response to ethanol response to decreased oxygen levels response to hypoxia response to oxygen levels reactive oxygen species biosynthetic process biosynthetic process reactive oxygen species metabolic process hydrogen peroxide metabolic process metabolic process hydrogen peroxide biosynthetic process response to hydrogen peroxide response to reactive oxygen species regulation of vascular associated smooth muscle cell proliferation negative regulation of cell population proliferation cell population proliferation regulation of smooth muscle cell proliferation negative regulation of biological process negative regulation of vascular associated smooth muscle cell proliferation smooth muscle cell proliferation negative regulation of smooth muscle cell proliferation regulation of cell population proliferation negative regulation of cellular process muscle cell proliferation vascular associated smooth muscle cell proliferation regulation of tube diameter acetylcholine-mediated vasodilation involved in regulation of systemic arterial blood pressure regulation of systemic arterial blood pressure by neurotransmitter regulation of systemic arterial blood pressure mediated by a chemical signal nervous system process regulation of systemic arterial blood pressure by acetylcholine regulation of tube size negative regulation of blood pressure regulation of systemic arterial blood pressure negative regulation of systemic arterial blood pressure vascular process in circulatory system blood vessel diameter maintenance nervous system process involved in regulation of systemic arterial blood pressure vasodilation regulation of anatomical structure size regulation of membrane hyperpolarization membrane hyperpolarization negative regulation of membrane hyperpolarization regulation of membrane potential response to manganese ion response to selenium ion response to magnetism detoxification response to superoxide cellular oxidant detoxification cellular response to oxygen radical cellular response to reactive oxygen species cellular detoxification response to toxic substance removal of superoxide radicals superoxide metabolic process cellular response to superoxide cellular response to toxic substance response to oxygen radical protein-containing complex organization protein homotetramerization cellular component organization cellular component biogenesis cellular component assembly protein complex oligomerization protein tetramerization protein-containing complex assembly protein homooligomerization cellular component organization or biogenesis response to activity neuron apoptotic process negative regulation of neuron apoptotic process negative regulation of programmed cell death regulation of apoptotic process regulation of programmed cell death cell death negative regulation of apoptotic process apoptotic process programmed cell death regulation of neuron apoptotic process intrinsic apoptotic signaling pathway in response to oxidative stress regulation of oxidative stress-induced intrinsic apoptotic signaling pathway signaling negative regulation of signaling negative regulation of intracellular signal transduction regulation of signal transduction regulation of intrinsic apoptotic signaling pathway intracellular signal transduction negative regulation of cell communication cell communication regulation of intracellular signal transduction negative regulation of apoptotic signaling pathway signal transduction intrinsic apoptotic signaling pathway regulation of signaling negative regulation of response to stimulus negative regulation of oxidative stress-induced intrinsic apoptotic signaling pathway negative regulation of signal transduction apoptotic signaling pathway negative regulation of intrinsic apoptotic signaling pathway regulation of response to stimulus regulation of cell communication regulation of apoptotic signaling pathway response to immobilization stress positive regulation of locomotion regulation of cell motility positive regulation of cell migration regulation of locomotion positive regulation of cell motility regulation of cell migration cell migration cell motility locomotion response to isolation stress multicellular organismal response to stress positive regulation of metabolic process positive regulation of biosynthetic process regulation of hydrogen peroxide metabolic process regulation of biosynthetic process regulation of hydrogen peroxide biosynthetic process positive regulation of reactive oxygen species biosynthetic process positive regulation of hydrogen peroxide biosynthetic process regulation of reactive oxygen species biosynthetic process positive regulation of reactive oxygen species metabolic process regulation of metabolic process regulation of reactive oxygen species metabolic process positive regulation of phenotypic switching regulation of phenotypic switching phenotypic switching RNA metabolic process regulation of primary metabolic process nucleobase-containing compound metabolic process RNA biosynthetic process nucleic acid biosynthetic process DNA-templated transcription regulation of RNA metabolic process transcription by RNA polymerase II regulation of nucleobase-containing compound metabolic process regulation of RNA biosynthetic process regulation of transcription by RNA polymerase II primary metabolic process regulation of macromolecule metabolic process nucleobase-containing compound biosynthetic process gene expression macromolecule biosynthetic process nucleic acid metabolic process regulation of gene expression regulation of macromolecule biosynthetic process regulation of DNA-templated transcription macromolecule metabolic process positive regulation of programmed cell death muscle cell apoptotic process positive regulation of smooth muscle cell apoptotic process smooth muscle cell apoptotic process regulation of muscle cell apoptotic process regulation of smooth muscle cell apoptotic process positive regulation of apoptotic process positive regulation of muscle cell apoptotic process vascular associated smooth muscle cell apoptotic process positive regulation of vascular associated smooth muscle cell apoptotic process regulation of vascular associated smooth muscle cell apoptotic process response to cadmium ion apoptotic mitochondrial changes release of cytochrome c from mitochondria organelle organization mitochondrion organization biological process involved in interspecies interaction between organisms response to lipid response to other organism response to external stimulus response to lipopolysaccharide response to biotic stimulus response to bacterium response to external biotic stimulus response to molecule of bacterial origin	extracellular exosome membrane-bounded organelle extracellular vesicle cellular anatomical structure extracellular organelle extracellular region organelle vesicle extracellular membrane-bounded organelle intracellular anatomical structure mitochondrion membrane-enclosed lumen intracellular membraneless organelle nucleoid extracellular exosome membrane-bounded organelle extracellular vesicle cellular anatomical structure extracellular organelle extracellular region organelle vesicle extracellular membrane-bounded organelle intracellular anatomical structure mitochondrion membrane-enclosed lumen intracellular membraneless organelle nucleoid intracellular membrane-bounded organelle mitochondrial matrix intracellular organelle lumen intracellular organelle organelle lumen membraneless organelle cytoplasm mitochondrial nucleoid

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B	IPR001189	Manganese/iron superoxide dismutase	Family
A, B	IPR019833	Manganese/iron superoxide dismutase, binding site	Binding Site
A, B	IPR019832	Manganese/iron superoxide dismutase, C-terminal	Domain
A, B	IPR019831	Manganese/iron superoxide dismutase, N-terminal	Domain
A, B	IPR036314	Manganese/iron superoxide dismutase, C-terminal domain superfamily	Homologous Superfamily
A, B	IPR036324	Manganese/iron superoxide dismutase, N-terminal domain superfamily	Homologous Superfamily
A, B	IPR050265	Iron/Manganese Superoxide Dismutase	Family

Pharos: Disease Associations Pharos Homepage Annotation

Chains	Drug Target	Associated Disease
A, B	: P04179	psoriasis plasma cell myeloma rheumatoid arthritis squamous cell carcinoma extrinsic allergic alveolitis Farber lipogranulomatosis abdominal aortic aneurysm perinatal asphyxia MELAS syndrome amyotrophic lateral sclerosis hyperthyroidism sarcoidosis Turner syndrome diffuse large B-cell lymphoma Marfan syndrome psoriasis plasma cell myeloma rheumatoid arthritis squamous cell carcinoma extrinsic allergic alveolitis Farber lipogranulomatosis abdominal aortic aneurysm perinatal asphyxia MELAS syndrome amyotrophic lateral sclerosis hyperthyroidism sarcoidosis Turner syndrome diffuse large B-cell lymphoma Marfan syndrome renal cell carcinoma classic familial adenomatous polyposis adrenoleukodystrophy uveitis sideroblastic anemia methylmalonic acidemia esophageal squamous cell carcinoma malignant mesothelioma cardiomyopathy invasive ductal breast carcinoma nasopharyngeal carcinoma dilated cardiomyopathy Sengers syndrome nephrotic syndrome Alzheimer disease middle cerebral artery infarction Esophageal Stenosis breast cancer hypertensive disorder obesity disorder male infertility progressive external ophthalmoplegia carcinoma anemia osteoporosis aortic disease ovarian cancer sarcomatoid renal cell carcinoma tubular adenocarcinoma chromophobe renal cell carcinoma adenocarcinoma papilloma autoimmune disease peripheral neuropathy bipolar disorder collecting duct carcinoma adult acute respiratory distress syndrome head and neck squamous cell carcinoma alcoholic liver cirrhosis brain ischemia esophageal cancer non-small cell lung carcinoma esophagitis breast carcinoma prostate cancer multiple chemical sensitivity thyroid gland undifferentiated (anaplastic) carcinoma myelomeningocele transient ischemic attack pulmonary hypertension myocardial infarction interstitial lung disease acute coronary syndrome atherosclerosis kidney disease perinatal necrotizing enterocolitis congestive heart failure skin neoplasm squamous papilloma major depressive disorder exocrine pancreatic carcinoma cancer hypoglycemia malignant colon neoplasm central nervous system disease sarcomatoid carcinoma radiation injury acute kidney tubular necrosis papillary renal cell carcinoma type 2 diabetes mellitus gestational diabetes Parkinson disease urinary bladder cancer granular cell carcinoma peripheral nervous system disease vascular disease colorectal cancer Lewy body dementia visual epilepsy microvascular complications of diabetes, susceptibility to, 6 skin cancer coronary artery disease cribriform carcinoma of breast osteoarthritis malignant ependymoma myeloid neoplasm cystic fibrosis fatty liver disease interstitial cystitis depressive disorder gastric cancer pustulosis palmaris et plantaris pancreatic intraductal papillary-mucinous neoplasm with low grade dysplasia ischemia reperfusion injury benign mesothelioma ulcerative colitis glioblastoma renal carcinoma kidney cancer dilated cardiomyopathy 1A urinary bladder neoplasm drug psychosis mesothelioma colorectal carcinoma Sjogren syndrome drug-induced liver injury skin disease lung carcinoma hepatocellular carcinoma Crohn disease osteoarthritis susceptibility 1 malignant glioma ovarian neoplasm transitional cell carcinoma gastric neoplasm myopathy schizophrenia pancreatic neoplasm B-cell chronic lymphocytic leukemia genetic intestinal polyposis chronic obstructive pulmonary disease necrotizing enterocolitis ischemic disease papillomatosis benign neoplasm undifferentiated carcinoma neoplasm of esophagus colonic neoplasm lung adenocarcinoma precancerous condition lung disease hereditary diffuse gastric adenocarcinoma primary ovarian failure cribriform carcinoma oral cavity neoplasm inborn mitochondrial metabolism disorder cutaneous lupus erythematosus tongue cancer myocardial ischemia dermatomyositis arteriosclerosis disorder tuberculosis malignant pancreatic neoplasm diabetic kidney disease benign colon neoplasm maturity-onset diabetes of the young clear cell renal carcinoma adrenomyeloneuropathy kidney neoplasm plasma cell neoplasm brain cancer head and neck cancer brain injury heart failure neurodegenerative disease lung cancer