Annotations: 8W1R

Cryo-EM structure of BTV core

External Resource: Annotation

Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
A	SCOP2B Superfamily	Reovirus inner layer core protein p3	8037636	3001935	SCOP2B (2022-06-29)
B	SCOP2B Superfamily	Reovirus inner layer core protein p3	8037636	3001935	SCOP2B (2022-06-29)
C	SCOP2B Superfamily	Reovirus inner layer core protein p3	8037636	3001935	SCOP2B (2022-06-29)
D	SCOP2B Superfamily	Reovirus inner layer core protein p3	8037636	3001935	SCOP2B (2022-06-29)
E	SCOP2B Superfamily	Reovirus inner layer core protein p3	8037636	3001935	SCOP2B (2022-06-29)
F	SCOP2B Superfamily	Reovirus inner layer core protein p3	8037636	3001935	SCOP2B (2022-06-29)
G	SCOP2B Superfamily	Reovirus inner layer core protein p3	8037636	3001935	SCOP2B (2022-06-29)
H	SCOP2B Superfamily	Reovirus inner layer core protein p3	8037636	3001935	SCOP2B (2022-06-29)
I	SCOP2B Superfamily	Reovirus inner layer core protein p3	8037636	3001935	SCOP2B (2022-06-29)
J	SCOP2B Superfamily	Reovirus inner layer core protein p3	8037636	3001935	SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
A	V-set	e8w1rA1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: V-set	ECOD (v295)
B	V-set	e8w1rB1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: V-set	ECOD (v295)
C	V-set	e8w1rC1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: V-set	ECOD (v295)
D	V-set	e8w1rD1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: V-set	ECOD (v295)
E	V-set	e8w1rE1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: V-set	ECOD (v295)
F	V-set	e8w1rF1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: V-set	ECOD (v295)
G	V-set	e8w1rG1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: V-set	ECOD (v295)
H	V-set	e8w1rH1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: V-set	ECOD (v295)
I	V-set	e8w1rI1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: V-set	ECOD (v295)
J	V-set	e8w1rJ1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: V-set	ECOD (v295)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
K	RNA-directed RNA polymerase	RNA-directed RNA polymerase activity 5'-3' RNA polymerase activity catalytic activity, acting on RNA catalytic activity, acting on a nucleic acid RNA polymerase activity transferase activity nucleotidyltransferase activity catalytic activity transferase activity, transferring phosphorus-containing groups RNA binding binding nucleic acid binding nucleoside phosphate binding nucleotide binding RNA-directed RNA polymerase activity 5'-3' RNA polymerase activity catalytic activity, acting on RNA catalytic activity, acting on a nucleic acid RNA polymerase activity transferase activity nucleotidyltransferase activity catalytic activity transferase activity, transferring phosphorus-containing groups RNA binding binding nucleic acid binding nucleoside phosphate binding nucleotide binding heterocyclic compound binding small molecule binding	RNA metabolic process primary metabolic process nucleobase-containing compound biosynthetic process gene expression macromolecule biosynthetic process nucleic acid metabolic process RNA biosynthetic process nucleobase-containing compound metabolic process DNA-templated transcription nucleic acid biosynthetic process biosynthetic process metabolic process cellular process macromolecule metabolic process RNA metabolic process primary metabolic process nucleobase-containing compound biosynthetic process gene expression macromolecule biosynthetic process nucleic acid metabolic process RNA biosynthetic process nucleobase-containing compound metabolic process DNA-templated transcription nucleic acid biosynthetic process biosynthetic process metabolic process cellular process macromolecule metabolic process viral genome replication viral process viral life cycle	-
A, B, C, D, E A, B, C, D, E, F, G, H, I, J	Core protein VP3	structural molecule activity	-	virion component

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
K	IPR008723	RNA-dependent RNA polymerase, orbiviral	Family
K	IPR007097	RNA-directed RNA polymerase, reovirus	Domain
K	IPR043502	DNA/RNA polymerase superfamily	Homologous Superfamily
A, B, C, D, E A, B, C, D, E, F, G, H, I, J	IPR016029	Inner layer core protein VP3, Reovirus	Homologous Superfamily
A, B, C, D, E A, B, C, D, E, F, G, H, I, J	IPR002614	Inner layer core protein VP3, Orbivirus	Family

RCSB PDB is hosted by

RCSB PDB is a member of

RCSB Partners
Nucleic Acid Knowledgebase

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.

8W1R | pdb_00008w1r

Cryo-EM structure of BTV core

External Resource: Annotation

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Domain Annotation: ECOD Classification ECOD Database Homepage

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

InterPro: Protein Family Classification InterPro Database Homepage