The cryo-EM structure of the octameric RAD51 ring bound to the nucleosome with the linker DNA binding
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
| Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
|---|---|---|---|---|---|
| R | SCOP2B Superfamily | Helix-hairpin-helix tandem | 8056645 | 3000163 | SCOP2B (2022-06-29) |
| R | SCOP2B Superfamily | RecA-like P-loop NTPases | 8056644 | 3002019 | SCOP2B (2022-06-29) |
| Q | SCOP2B Superfamily | RecA-like P-loop NTPases | 8056644 | 3002019 | SCOP2B (2022-06-29) |
| P | SCOP2B Superfamily | RecA-like P-loop NTPases | 8056644 | 3002019 | SCOP2B (2022-06-29) |
| P | SCOP2B Superfamily | Helix-hairpin-helix tandem | 8056645 | 3000163 | SCOP2B (2022-06-29) |
| O | SCOP2B Superfamily | Helix-hairpin-helix tandem | 8056645 | 3000163 | SCOP2B (2022-06-29) |
| O | SCOP2B Superfamily | RecA-like P-loop NTPases | 8056644 | 3002019 | SCOP2B (2022-06-29) |
| N | SCOP2B Superfamily | RecA-like P-loop NTPases | 8056644 | 3002019 | SCOP2B (2022-06-29) |
| M | SCOP2B Superfamily | RecA-like P-loop NTPases | 8056644 | 3002019 | SCOP2B (2022-06-29) |
| L | SCOP2B Superfamily | RecA-like P-loop NTPases | 8056644 | 3002019 | SCOP2B (2022-06-29) |
| K | SCOP2B Superfamily | Helix-hairpin-helix tandem | 8056645 | 3000163 | SCOP2B (2022-06-29) |
| K | SCOP2B Superfamily | RecA-like P-loop NTPases | 8056644 | 3002019 | SCOP2B (2022-06-29) |
| G | SCOP2B Superfamily | Core histone-like | 8039342 | 3001387 | SCOP2B (2022-06-29) |
| C | SCOP2B Superfamily | Core histone-like | 8039342 | 3001387 | SCOP2B (2022-06-29) |
| F | SCOP2B Superfamily | Core histone-like | 8070545 | 3001387 | SCOP2B (2022-06-29) |
| B | SCOP2B Superfamily | Core histone-like | 8070545 | 3001387 | SCOP2B (2022-06-29) |
| E | SCOP2B Superfamily | Core histone-like | 8039340 | 3001387 | SCOP2B (2022-06-29) |
| A | SCOP2B Superfamily | Core histone-like | 8039340 | 3001387 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| R | WD40 | e8xbtR1 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: acid protease | F: WD40 | ECOD (v294.2) |
| Q | WD40 | e8xbtQ1 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: acid protease | F: WD40 | ECOD (v294.2) |
| P | WD40 | e8xbtP1 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: acid protease | F: WD40 | ECOD (v294.2) |
| O | WD40 | e8xbtO1 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: acid protease | F: WD40 | ECOD (v294.2) |
| N | WD40 | e8xbtN1 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: acid protease | F: WD40 | ECOD (v294.2) |
| M | WD40 | e8xbtM1 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: acid protease | F: WD40 | ECOD (v294.2) |
| L | WD40 | e8xbtL1 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: acid protease | F: WD40 | ECOD (v294.2) |
| K | WD40 | e8xbtK1 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: acid protease | F: WD40 | ECOD (v294.2) |
| H | WD40 | e8xbtH1 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: acid protease | F: WD40 | ECOD (v294.2) |
| D | WD40 | e8xbtD1 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: acid protease | F: WD40 | ECOD (v294.2) |
| G | WD40 | e8xbtG1 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: acid protease | F: WD40 | ECOD (v294.2) |
| C | WD40 | e8xbtC1 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: acid protease | F: WD40 | ECOD (v294.2) |
| F | WD40 | e8xbtF1 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: acid protease | F: WD40 | ECOD (v294.2) |
| B | WD40 | e8xbtB1 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: acid protease | F: WD40 | ECOD (v294.2) |
| E | WD40 | e8xbtE1 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: acid protease | F: WD40 | ECOD (v294.2) |
| A | WD40 | e8xbtA1 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: acid protease | F: WD40 | ECOD (v294.2) |
Protein Family Annotation Pfam Database Homepage
| Chains | Accession | Name | Description | Comments | Source |
|---|---|---|---|---|---|
| PF14520 | SAM-like Helix-hairpin-helix tandem (HHH_5) | SAM-like Helix-hairpin-helix tandem | This entry represents a SAM-like helix-hairpin-helix domain found in functionally diverse proteins involved in DNA repair, recombination, transcription termination etc. This domain has a fold that is structurally similar to SAM domains. It is compose ... | Domain | |
| PF16211 | C-terminus of histone H2A (Histone_H2A_C) | C-terminus of histone H2A | - | Family | |
| PF15511 | Centromere kinetochore component CENP-T histone fold (CENP-T_C) | Centromere kinetochore component CENP-T histone fold | CENP-T is a family of vertebral kinetochore proteins that associates directly with CENP-W. The N-terminus of CENP-T proteins interacts directly with the Ndc80 complex in the outer kinetochore. Importantly, the CENP-T-W complex does not directly asso ... | Domain | |
| PF00125 | Core histone H2A/H2B/H3/H4 domain (Histone) | Core histone H2A/H2B/H3/H4 domain | Domain |














