9DCH | pdb_00009dch

Single-stranded RNA-mediated PRC2 dimer


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
C [auth B]SCOP2B SuperfamilyVEFS box-like 8090819 3002459 SCOP2B (2022-06-29)
ISCOP2B SuperfamilyVEFS box-like 8090819 3002459 SCOP2B (2022-06-29)
DSCOP2B SuperfamilyWD40 repeat-like 8053350 3001694 SCOP2B (2022-06-29)
J [auth K]SCOP2B SuperfamilyWD40 repeat-like 8053350 3001694 SCOP2B (2022-06-29)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
B [auth A],
H
PF18264CXC domain (preSET_CXC)CXC domainThis domain is found to the N-terminus of the SET domain in the EZH2 protein [1]. It is a zinc binding domain. Domain
B [auth A],
H
PF00856SET domain (SET)SET domain- Family
B [auth A],
H
PF11616WD repeat binding protein EZH2 (EZH2_WD-Binding)WD repeat binding protein EZH2- Family
D,
J [auth K]
PF12265Histone-binding protein RBBP4 or subunit C of CAF1 complex (CAF1C_H4-bd)Histone-binding protein RBBP4 or subunit C of CAF1 complex- Repeat
D,
J [auth K]
PF00400WD domain, G-beta repeat (WD40)WD domain, G-beta repeat- Repeat
G [auth C],
M [auth J]
PF00400WD domain, G-beta repeat (WD40)WD domain, G-beta repeat- Repeat

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A [auth G]TERRAmut RNA---
B [auth A],
H
Isoform 2 of Histone-lysine N-methyltransferase EZH2
C [auth B],
I
Polycomb protein SUZ12
D,
J [auth K]
RBAP48
E [auth F],
K [auth M]
Zinc finger protein AEBP2
F [auth E],
L
Protein Jumonji
G [auth C],
M [auth J]
Polycomb protein EED

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
B [auth A],
H
IPR048358EZH1/2, MCSS domainDomain
B [auth A],
H
IPR041343Polycomb repressive complex 2 subunit EZH1/EZH2, tri-helical domainDomain
B [auth A],
H
IPR046341SET domain superfamilyHomologous Superfamily
B [auth A],
H
IPR001214SET domainDomain
B [auth A],
H
IPR045318Histone-lysine N-methyltransferase EZH1/2-likeFamily
B [auth A],
H
IPR033467Tesmin/TSO1-like CXC domainDomain
B [auth A],
H
IPR044439EZH2, SET domainDomain
B [auth A],
H
IPR026489CXC domainDomain
B [auth A],
H
IPR041355Pre-SET CXC domainDomain
B [auth A],
H
IPR001005SANT/Myb domainDomain
B [auth A],
H
IPR021654Histone-lysine N-methyltransferase EZH1/EZH2Family
C [auth B],
I
IPR019135Polycomb protein, VEFS-BoxDomain
D,
J [auth K]
IPR050459WD repeat RBAP46/RBAP48/MSI1Family
D,
J [auth K]
IPR019775WD40 repeat, conserved siteConserved Site
D,
J [auth K]
IPR015943WD40/YVTN repeat-like-containing domain superfamilyHomologous Superfamily
D,
J [auth K]
IPR036322WD40-repeat-containing domain superfamilyHomologous Superfamily
D,
J [auth K]
IPR022052Histone-binding protein RBBP4-like, N-terminalDomain
D,
J [auth K]
IPR001680WD40 repeatRepeat
D,
J [auth K]
IPR020472G-protein beta WD-40 repeatRepeat
E [auth F],
K [auth M]
IPR013087Zinc finger C2H2-typeDomain
E [auth F],
K [auth M]
IPR036236Zinc finger C2H2 superfamilyHomologous Superfamily
E [auth F],
K [auth M]
IPR052130AEBP2/jing C2H2-type zinc-fingerFamily
F [auth E],
L
IPR003347JmjC domainDomain
F [auth E],
L
IPR003349JmjN domainDomain
F [auth E],
L
IPR001606ARID DNA-binding domainDomain
F [auth E],
L
IPR004198Zinc finger, C5HC2-typeDomain
F [auth E],
L
IPR036431ARID DNA-binding domain superfamilyHomologous Superfamily
G [auth C],
M [auth J]
IPR019775WD40 repeat, conserved siteConserved Site
G [auth C],
M [auth J]
IPR036322WD40-repeat-containing domain superfamilyHomologous Superfamily
G [auth C],
M [auth J]
IPR001680WD40 repeatRepeat
G [auth C],
M [auth J]
IPR015943WD40/YVTN repeat-like-containing domain superfamilyHomologous Superfamily
G [auth C],
M [auth J]
IPR051243Polycomb group WD repeat-containing proteinFamily

Pharos: Disease Associations Pharos Homepage Annotation

ChainsDrug Target  Associated Disease
B [auth A],
H
PharosQ15910
C [auth B],
I
PharosQ15022
D,
J [auth K]
PharosQ09028
E [auth F],
K [auth M]
PharosQ6ZN18
F [auth E],
L
PharosQ92833
G [auth C],
M [auth J]
PharosO75530