Annotations: 9EMM

Glucose-6-phosphate dehydrogenase (G6PDH) in complex with protein OpcA from Synechocystis sp. PCC 6803

External Resource: Annotation

Domain Annotation: ECOD Classification
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
C	WD40	e9emmC1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: WD40	ECOD (v294.2)
D	WD40	e9emmD1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: WD40	ECOD (v294.2)
E [auth B]	WD40	e9emmB1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: WD40	ECOD (v294.2)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A, C, D, E [auth B]	PF00479	Glucose-6-phosphate dehydrogenase, NAD binding domain (G6PD_N)	Glucose-6-phosphate dehydrogenase, NAD binding domain		Domain
A, C, D, E [auth B]	PF02781	Glucose-6-phosphate dehydrogenase, C-terminal domain (G6PD_C)	Glucose-6-phosphate dehydrogenase, C-terminal domain		Domain
B [auth E]	PF01471	Putative peptidoglycan binding domain (PG_binding_1)	Putative peptidoglycan binding domain	This domain is composed of three alpha helices [1]. This domain is found at the N or C terminus of a variety of enzymes involved in bacterial cell wall degradation [2]. This domain may have a general peptidoglycan binding function. This family is ...	This domain is composed of three alpha helices [1]. This domain is found at the N or C terminus of a variety of enzymes involved in bacterial cell wall degradation [2]. This domain may have a general peptidoglycan binding function. This family is found N-terminal to the catalytic domain of matrixins [3]. The domain is found to bind peptidoglycan experimentally [4].	Domain
B [auth E]	PF20171	Glucose-6-phosphate dehydrogenase subunit C-terminal domain (OpcA_G6PD_C)	Glucose-6-phosphate dehydrogenase subunit C-terminal domain	Members of this family are found in various prokaryotic OpcA and glucose-6-phosphate dehydrogenase proteins. This entry represents the C-terminal domain.	Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, C, D, E [auth B]	Glucose-6-phosphate 1-dehydrogenase	binding nucleoside phosphate binding purine nucleotide binding adenyl nucleotide binding nucleotide binding heterocyclic compound binding NADP binding small molecule binding oxidoreductase activity oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor oxidoreductase activity, acting on CH-OH group of donors catalytic activity glucose-6-phosphate dehydrogenase activity	nucleoside phosphate metabolic process nicotinamide nucleotide metabolic process carbohydrate derivative metabolic process pentose-phosphate shunt, oxidative branch primary metabolic process generation of precursor metabolites and energy glucose 6-phosphate metabolic process nucleotide metabolic process NADP+ metabolic process purine-containing compound metabolic process nucleobase-containing compound metabolic process NADPH regeneration purine nucleotide metabolic process organophosphate metabolic process nucleobase-containing small molecule metabolic process nucleoside phosphate metabolic process nicotinamide nucleotide metabolic process carbohydrate derivative metabolic process pentose-phosphate shunt, oxidative branch primary metabolic process generation of precursor metabolites and energy glucose 6-phosphate metabolic process nucleotide metabolic process NADP+ metabolic process purine-containing compound metabolic process nucleobase-containing compound metabolic process NADPH regeneration purine nucleotide metabolic process organophosphate metabolic process nucleobase-containing small molecule metabolic process pentose-phosphate shunt pyridine-containing compound metabolic process metabolic process cellular process small molecule metabolic process phosphorus metabolic process monosaccharide metabolic process carbohydrate metabolic process hexose metabolic process glucose metabolic process	cellular anatomical structure intracellular anatomical structure cytoplasm cytosol
B [auth E]	Putative OxPP cycle protein OpcA	-	-	-

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, C, D, E [auth B]	IPR022675	Glucose-6-phosphate dehydrogenase, C-terminal	Domain
A, C, D, E [auth B]	IPR036291	NAD(P)-binding domain superfamily	Homologous Superfamily
A, C, D, E [auth B]	IPR019796	Glucose-6-phosphate dehydrogenase, active site	Active Site
A, C, D, E [auth B]	IPR001282	Glucose-6-phosphate dehydrogenase	Family
A, C, D, E [auth B]	IPR022674	Glucose-6-phosphate dehydrogenase, NAD-binding	Domain
B [auth E]	IPR002477	Peptidoglycan binding-like	Domain
B [auth E]	IPR036365	PGBD-like superfamily	Homologous Superfamily
B [auth E]	IPR046801	Glucose-6-phosphate dehydrogenase assembly protein OpcA, N-terminal domain	Domain
B [auth E]	IPR046802	Glucose-6-phosphate dehydrogenase assembly protein OpcA, C-terminal domain	Domain
B [auth E]	IPR004555	Glucose-6-phosphate dehydrogenase assembly protein OpcA	Family
B [auth E]	IPR036366	PGBD superfamily	Homologous Superfamily

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RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.

9EMM | pdb_00009emm

Glucose-6-phosphate dehydrogenase (G6PDH) in complex with protein OpcA from Synechocystis sp. PCC 6803

External Resource: Annotation

Domain Annotation: ECOD Classification ECOD Database Homepage

Protein Family Annotation Pfam Database Homepage

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

InterPro: Protein Family Classification InterPro Database Homepage