Cryo-EM structure of Staphylococcus aureus bacteriophage phi812 baseplate in the post-contraction state - complete
External Resource: Annotation
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| P | WD40 | e9euiP1 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: acid protease | F: WD40 | ECOD (v294.2) |
| O | WD40 | e9euiO1 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: acid protease | F: WD40 | ECOD (v294.2) |
| N | WD40 | e9euiN1 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: acid protease | F: WD40 | ECOD (v294.2) |
| M | WD40 | e9euiM1 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: acid protease | F: WD40 | ECOD (v294.2) |
| L | WD40 | e9euiL1 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: acid protease | F: WD40 | ECOD (v294.2) |
| K | WD40 | e9euiK1 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: acid protease | F: WD40 | ECOD (v294.2) |
Protein Family Annotation Pfam Database Homepage
| Chains | Accession | Name | Description | Comments | Source |
|---|---|---|---|---|---|
| PF04865 | Baseplate J-like protein barrel domain (Baseplate_J) | Baseplate J-like protein barrel domain | The P2 bacteriophage J protein lies at the edge of the baseplate. This family also includes a number of bacterial homologues, which are thought to have been horizontally transferred. This entry represents a six stranded beta barrel domain found in va ... | Domain | |
| PF10934 | Contractile injection system sheath initiator (Sheath_initiator) | Contractile injection system sheath initiator | - | Family |
InterPro: Protein Family Classification InterPro Database Homepage
| Chains | Accession | Name | Type |
|---|---|---|---|
| IPR057110 | ORF68, C-terminal | Domain | |
| IPR058040 | Baseplate wedge 3 tail fiber network component | Family | |
| IPR006949 | Baseplate protein J-like, barrel domain | Domain | |
| IPR036779 | LysM domain superfamily | Homologous Superfamily | |
| IPR020288 | Contractile injection system sheath initiator | Family | |
| IPR018392 | LysM domain | Domain |














