Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
ASCOP2B SuperfamilyRibonuclease H-like 8104381 3000143 SCOP2B (2022-06-29)
CSCOP2B SuperfamilyRibonuclease H-like 8104381 3000143 SCOP2B (2022-06-29)
ESCOP2B SuperfamilyRibonuclease H-like 8104381 3000143 SCOP2B (2022-06-29)
GSCOP2B SuperfamilyRibonuclease H-like 8104381 3000143 SCOP2B (2022-06-29)
ISCOP2B SuperfamilyRibonuclease H-like 8104381 3000143 SCOP2B (2022-06-29)
KSCOP2B SuperfamilyRibonuclease H-like 8104381 3000143 SCOP2B (2022-06-29)
MSCOP2B SuperfamilyRibonuclease H-like 8104381 3000143 SCOP2B (2022-06-29)
OSCOP2B SuperfamilyRibonuclease H-like 8104381 3000143 SCOP2B (2022-06-29)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A, C, E, G, I
PF016123'-5' exonuclease (DNA_pol_A_exo1)3'-5' exonucleaseThis domain is responsible for the 3'-5' exonuclease proofreading activity of E. coli DNA polymerase I (polI) and other enzymes, it catalyses the hydrolysis of unpaired or mismatched nucleotides. This domain consists of the amino-terminal half of the ...This domain is responsible for the 3'-5' exonuclease proofreading activity of E. coli DNA polymerase I (polI) and other enzymes, it catalyses the hydrolysis of unpaired or mismatched nucleotides. This domain consists of the amino-terminal half of the Klenow fragment in E. coli polI it is also found in the Werner syndrome helicase (WRN), focus forming activity 1 protein (FFA-1) and ribonuclease D (RNase D). Werner syndrome is a human genetic disorder causing premature aging; the WRN protein has helicase activity in the 3'-5' direction [4,5]. The FFA-1 protein is required for formation of a replication foci and also has helicase activity; it is a homologue of the WRN protein [3]. RNase D is a 3'-5' exonuclease involved in tRNA processing. Also found in this family is the autoantigen PM/Scl thought to be involved in polymyositis-scleroderma overlap syndrome.
Domain

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A, C, E, G, I
IPR036397Ribonuclease H superfamilyHomologous Superfamily
A, C, E, G, I
IPR051086Ribonuclease D-likeFamily
A, C, E, G, I
IPR012337Ribonuclease H-like superfamilyHomologous Superfamily
A, C, E, G, I
IPR0025623'-5' exonuclease domainDomain