9GO6 | pdb_00009go6

Salmonella hook-filament junction complex


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
TA [auth o]SCOP2B SuperfamilyFlgL-like 8054354 3002287 SCOP2B (2022-06-29)
TA [auth o]SCOP2B SuperfamilyFliC central-region like 8034125 3001385 SCOP2B (2022-06-29)
TA [auth o]SCOP2B SuperfamilyFlgL-like 8054354 3002287 SCOP2B (2022-06-29)
SA [auth n]SCOP2B SuperfamilyFlgL-like 8054354 3002287 SCOP2B (2022-06-29)
SA [auth n]SCOP2B SuperfamilyFlgL-like 8054354 3002287 SCOP2B (2022-06-29)
SA [auth n]SCOP2B SuperfamilyFliC central-region like 8034125 3001385 SCOP2B (2022-06-29)
RA [auth m]SCOP2B SuperfamilyFlgL-like 8054354 3002287 SCOP2B (2022-06-29)
RA [auth m]SCOP2B SuperfamilyFlgL-like 8054354 3002287 SCOP2B (2022-06-29)
RA [auth m]SCOP2B SuperfamilyFliC central-region like 8034125 3001385 SCOP2B (2022-06-29)
QA [auth l]SCOP2B SuperfamilyFlgL-like 8054354 3002287 SCOP2B (2022-06-29)
QA [auth l]SCOP2B SuperfamilyFlgL-like 8054354 3002287 SCOP2B (2022-06-29)
QA [auth l]SCOP2B SuperfamilyFliC central-region like 8034125 3001385 SCOP2B (2022-06-29)
PA [auth k]SCOP2B SuperfamilyFlgL-like 8054354 3002287 SCOP2B (2022-06-29)
PA [auth k]SCOP2B SuperfamilyFlgL-like 8054354 3002287 SCOP2B (2022-06-29)
PA [auth k]SCOP2B SuperfamilyFliC central-region like 8034125 3001385 SCOP2B (2022-06-29)
OA [auth j]SCOP2B SuperfamilyFlgL-like 8054354 3002287 SCOP2B (2022-06-29)
OA [auth j]SCOP2B SuperfamilyFlgL-like 8054354 3002287 SCOP2B (2022-06-29)
OA [auth j]SCOP2B SuperfamilyFliC central-region like 8034125 3001385 SCOP2B (2022-06-29)
NA [auth i]SCOP2B SuperfamilyFlgL-like 8054354 3002287 SCOP2B (2022-06-29)
NA [auth i]SCOP2B SuperfamilyFlgL-like 8054354 3002287 SCOP2B (2022-06-29)
NA [auth i]SCOP2B SuperfamilyFliC central-region like 8034125 3001385 SCOP2B (2022-06-29)
MA [auth h]SCOP2B SuperfamilyFlgL-like 8054354 3002287 SCOP2B (2022-06-29)
MA [auth h]SCOP2B SuperfamilyFlgL-like 8054354 3002287 SCOP2B (2022-06-29)
MA [auth h]SCOP2B SuperfamilyFliC central-region like 8034125 3001385 SCOP2B (2022-06-29)
LA [auth g]SCOP2B SuperfamilyFlgL-like 8054354 3002287 SCOP2B (2022-06-29)
LA [auth g]SCOP2B SuperfamilyFliC central-region like 8034125 3001385 SCOP2B (2022-06-29)
LA [auth g]SCOP2B SuperfamilyFlgL-like 8054354 3002287 SCOP2B (2022-06-29)
KA [auth f]SCOP2B SuperfamilyFlgL-like 8054354 3002287 SCOP2B (2022-06-29)
KA [auth f]SCOP2B SuperfamilyFliC central-region like 8034125 3001385 SCOP2B (2022-06-29)
KA [auth f]SCOP2B SuperfamilyFlgL-like 8054354 3002287 SCOP2B (2022-06-29)
JA [auth e]SCOP2B SuperfamilyFliC central-region like 8034125 3001385 SCOP2B (2022-06-29)
JA [auth e]SCOP2B SuperfamilyFlgL-like 8054354 3002287 SCOP2B (2022-06-29)
JA [auth e]SCOP2B SuperfamilyFlgL-like 8054354 3002287 SCOP2B (2022-06-29)
IA [auth d]SCOP2B SuperfamilyFlgL-like 8054354 3002287 SCOP2B (2022-06-29)
IA [auth d]SCOP2B SuperfamilyFliC central-region like 8034125 3001385 SCOP2B (2022-06-29)
IA [auth d]SCOP2B SuperfamilyFlgL-like 8054354 3002287 SCOP2B (2022-06-29)
HA [auth c]SCOP2B SuperfamilyFliC central-region like 8034125 3001385 SCOP2B (2022-06-29)
HA [auth c]SCOP2B SuperfamilyFlgL-like 8054354 3002287 SCOP2B (2022-06-29)
HA [auth c]SCOP2B SuperfamilyFlgL-like 8054354 3002287 SCOP2B (2022-06-29)
GA [auth b]SCOP2B SuperfamilyFlgL-like 8054354 3002287 SCOP2B (2022-06-29)
GA [auth b]SCOP2B SuperfamilyFlgL-like 8054354 3002287 SCOP2B (2022-06-29)
GA [auth b]SCOP2B SuperfamilyFliC central-region like 8034125 3001385 SCOP2B (2022-06-29)
FA [auth a]SCOP2B SuperfamilyFlgL-like 8054354 3002287 SCOP2B (2022-06-29)
FA [auth a]SCOP2B SuperfamilyFlgL-like 8054354 3002287 SCOP2B (2022-06-29)
FA [auth a]SCOP2B SuperfamilyFliC central-region like 8034125 3001385 SCOP2B (2022-06-29)
Z [auth Q]SCOP2B SuperfamilyFlgL-like 8054356 3002287 SCOP2B (2022-06-29)
Y [auth P]SCOP2B SuperfamilyFlgL-like 8054356 3002287 SCOP2B (2022-06-29)
X [auth O]SCOP2B SuperfamilyFlgL-like 8054356 3002287 SCOP2B (2022-06-29)
W [auth N]SCOP2B SuperfamilyFlgL-like 8054356 3002287 SCOP2B (2022-06-29)
V [auth M]SCOP2B SuperfamilyFlgL-like 8054356 3002287 SCOP2B (2022-06-29)
U [auth L]SCOP2B SuperfamilyFlgL-like 8054356 3002287 SCOP2B (2022-06-29)
EA [auth V]SCOP2B SuperfamilyFlgL-like 8054356 3002287 SCOP2B (2022-06-29)
DA [auth U]SCOP2B SuperfamilyFlgL-like 8054356 3002287 SCOP2B (2022-06-29)
CA [auth T]SCOP2B SuperfamilyFlgL-like 8054356 3002287 SCOP2B (2022-06-29)
BA [auth S]SCOP2B SuperfamilyFlgL-like 8054356 3002287 SCOP2B (2022-06-29)
AA [auth R]SCOP2B SuperfamilyFlgL-like 8054356 3002287 SCOP2B (2022-06-29)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
PF08884Flagellin D3 domain (Flagellin_D3)Flagellin D3 domainThis domain is found in the central portion bacterial flagellin FliC. The domain contains a structural motif called a beta-folium fold [1]. Although no specific function is assigned to this domain its deletion leads to a reduction in filament stabi ...This domain is found in the central portion bacterial flagellin FliC. The domain contains a structural motif called a beta-folium fold [1]. Although no specific function is assigned to this domain its deletion leads to a reduction in filament stability [2].
Domain
PF00669Bacterial flagellin N-terminal helical region (Flagellin_N)Bacterial flagellin N-terminal helical region- Family
PF00700Bacterial flagellin C-terminal helical region (Flagellin_C)Bacterial flagellin C-terminal helical regionFlagellins polymerise to form bacterial flagella. There is some similarity between this entry and Pfam:PF00669, particularly the motif NRFXSXIXXL. It has been suggested that these two regions associate [2] and this is shown to be correct as structur ...Flagellins polymerise to form bacterial flagella. There is some similarity between this entry and Pfam:PF00669, particularly the motif NRFXSXIXXL. It has been suggested that these two regions associate [2] and this is shown to be correct as structurally this domain forms an extended helix that interacts with the N-terminal region (Pfam:PF00669) to form the D0 and D1 structural domains [3]. These domains are responsible for the activation of TLR5, with the C-terminal D0 region playing a key role [4-6].
Domain
PF08884Flagellin D3 domain (Flagellin_D3)Flagellin D3 domainThis domain is found in the central portion bacterial flagellin FliC. The domain contains a structural motif called a beta-folium fold [1]. Although no specific function is assigned to this domain its deletion leads to a reduction in filament stabi ...This domain is found in the central portion bacterial flagellin FliC. The domain contains a structural motif called a beta-folium fold [1]. Although no specific function is assigned to this domain its deletion leads to a reduction in filament stability [2].
Domain
PF00669Bacterial flagellin N-terminal helical region (Flagellin_N)Bacterial flagellin N-terminal helical region- Family
PF21504Flagellin, barrel domain (FLIC_barrel)Flagellin, barrel domainThis entry represents a barrel domain of flagellins FliC and FljB, which have a boomerang-shape with one arm composed of domain D1 and the other formed by D2 and D3 [1-3]. This entry corresponds to to subdomain D2b described in [4]. Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
Flagellin
Flagellar hook-associated protein
Flagellar hook-associated protein 1
Flagellar hook protein FlgE-

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
IPR049365Flagellin, barrel domainDomain
IPR046358Flagellin, C-terminal domainDomain
IPR014981Flagellin D3Domain
IPR001029Flagellin, N-terminal domainDomain
IPR042187Flagellin, C-terminal domain, subdomain 2Homologous Superfamily
IPR001492FlagellinFamily
IPR013384Flagellar hook-associated protein 3Family
IPR001029Flagellin, N-terminal domainDomain
IPR001492FlagellinFamily
IPR049119Flagellar hook-associated protein 1, D2-like domainDomain
IPR019776Flagellar basal body rod protein, conserved siteConserved Site
IPR002371Flagellar hook-associated protein 1Family
IPR053927Flagellar hook-associated protein FlgK, helical domainDomain
IPR010930Flagellar basal-body/hook protein, C-terminal domainDomain
IPR001444Flagellar basal body rod protein, N-terminalDomain
IPR011491Flagellar hook protein FlgE, D2 domainDomain
IPR019776Flagellar basal body rod protein, conserved siteConserved Site
IPR020013Flagellar hook-basal body protein, FlgE/F/GFamily
IPR010930Flagellar basal-body/hook protein, C-terminal domainDomain
IPR053967Flagellar hook protein FlgE/F/G-like, D1 domainDomain
IPR037058Flagellar hook protein FlgE superfamilyHomologous Superfamily
IPR001444Flagellar basal body rod protein, N-terminalDomain
IPR037925Flagellar hook-basal body protein, FlgE/F/G-likeHomologous Superfamily