9P3U | pdb_00009p3u

Zebrafish TRPM5 E337A mutant with 5mM calcium and 0.5mM CBTA

External Resource: Annotation

Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A [auth C], B [auth A], C [auth B], D	PF18139	SLOG in TRPM (LSDAT_euk)	SLOG in TRPM	Family in the SLOG superfamily, found in several eukaryotic channels including diverse ciliate channels and the TRPM class of animal ion channels. Positioned near the N-terminus of all TRPM channels, it is predicted to play a regulatory role for the ...	Family in the SLOG superfamily, found in several eukaryotic channels including diverse ciliate channels and the TRPM class of animal ion channels. Positioned near the N-terminus of all TRPM channels, it is predicted to play a regulatory role for the channel in potentially recognizing a universal nucleotide or nucleotide-derived ligand [1].	Domain
A [auth C], B [auth A], C [auth B], D	PF25508	TRPM2-like domain (TRPM2)	TRPM2-like domain	This domain is found in human Transient receptor potential cation channel subfamily M member 2 (TRPM2) and similar proteins. TRPM2 is a nonselective, voltage-independent cation channel that mediates Na+ and Ca2+ influx, leading to increased cytoplasm ...	This domain is found in human Transient receptor potential cation channel subfamily M member 2 (TRPM2) and similar proteins. TRPM2 is a nonselective, voltage-independent cation channel that mediates Na+ and Ca2+ influx, leading to increased cytoplasmic Ca2+ levels. It plays a role in mediating behavioural and physiological responses to moderate heat, insulin secretion, dendritic cell differentiation and maturation and the the regulation of the reorganisation of the actin cytoskeleton and filopodia formation. This domain is found associated with Pfam:PF00520 and adopts an all-alpha configuration.	Domain
A [auth C], B [auth A], C [auth B], D	PF00520	Ion transport protein (Ion_trans)	Ion transport protein	-	Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A [auth C], B [auth A], C [auth B], D	RNA-directed RNA polymerase L,Transient receptor potential cation channel subfamily M member 5	binding adenyl ribonucleotide binding nucleotide binding purine ribonucleotide binding purine ribonucleoside triphosphate binding nucleoside phosphate binding ion binding purine nucleotide binding anion binding adenyl nucleotide binding ATP binding heterocyclic compound binding carbohydrate derivative binding ribonucleotide binding binding adenyl ribonucleotide binding nucleotide binding purine ribonucleotide binding purine ribonucleoside triphosphate binding nucleoside phosphate binding ion binding purine nucleotide binding anion binding adenyl nucleotide binding ATP binding heterocyclic compound binding carbohydrate derivative binding ribonucleotide binding small molecule binding RNA methyltransferase activity catalytic activity, acting on RNA transferase activity, transferring one-carbon groups catalytic activity, acting on a nucleic acid transferase activity S-adenosylmethionine-dependent methyltransferase activity mRNA 5'-cap (guanine-N7-)-methyltransferase activity N-methyltransferase activity methyltransferase activity catalytic activity mRNA methyltransferase activity RNA-directed RNA polymerase activity 5'-3' RNA polymerase activity RNA polymerase activity nucleotidyltransferase activity transferase activity, transferring phosphorus-containing groups hydrolase activity cation binding metal ion binding calcium ion binding calcium channel activity monoatomic cation transmembrane transporter activity monoatomic ion channel activity monoatomic cation channel activity passive transmembrane transporter activity calcium ion transmembrane transporter activity channel activity monoatomic ion transmembrane transporter activity transporter activity metal ion transmembrane transporter activity transmembrane transporter activity calcium-activated cation channel activity gated channel activity monoatomic ion-gated channel activity ligand-gated channel activity ligand-gated monoatomic ion channel activity ligand-gated monoatomic cation channel activity identical protein binding protein binding	bioluminescence metabolic process cellular process generation of precursor metabolites and energy	virion component host cellular component host intracellular part cellular anatomical structure host cell cytoplasm host cell part host intracellular region other organism part cell periphery plasma membrane membrane

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A [auth C], B [auth A], C [auth B], D	IPR014023	Mononegavirales RNA-directed RNA polymerase catalytic domain	Domain
A [auth C], B [auth A], C [auth B], D	IPR025786	Mononegavirus L protein 2-O-ribose methyltransferase	Domain
A [auth C], B [auth A], C [auth B], D	IPR026890	Mononegavirales mRNA-capping domain V	Domain
A [auth C], B [auth A], C [auth B], D	IPR000786	Green fluorescent protein, GFP	Family
A [auth C], B [auth A], C [auth B], D	IPR011584	Green fluorescent protein-related	Family
A [auth C], B [auth A], C [auth B], D	IPR039736	RNA-directed RNA polymerase L, C-terminal	Domain
A [auth C], B [auth A], C [auth B], D	IPR009017	Green fluorescent protein	Homologous Superfamily
A [auth C], B [auth A], C [auth B], D	IPR039530	RNA-directed RNA polymerase L methyltransferase domain, rhabdovirus	Domain
A [auth C], B [auth A], C [auth B], D	IPR005821	Ion transport domain	Domain
A [auth C], B [auth A], C [auth B], D	IPR057366	TRPM-like domain	Domain
A [auth C], B [auth A], C [auth B], D	IPR041491	TRPM, SLOG domain	Domain
A [auth C], B [auth A], C [auth B], D	IPR050927	Transient receptor potential cation channel M	Family
A [auth C], B [auth A], C [auth B], D	IPR002153	Transient receptor potential channel, canonical	Family

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.