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 9SKE | pdb_00009ske

Model of M. pneumoniae 50S RRF EF-G


Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
B [auth 1]50S ribosomal protein L35
C [auth 2]50S ribosomal protein L36
D [auth 3]23S ribosomal RNA---
F [auth 7]Ribosome-recycling factor
H [auth A]Elongation factor G
M [auth F]50S ribosomal protein L10
N [auth a]Large ribosomal subunit protein uL2
O [auth b]Large ribosomal subunit protein uL3
P [auth c]Large ribosomal subunit protein uL4
R [auth e]Large ribosomal subunit protein uL6
S [auth f]Large ribosomal subunit protein bL9
V [auth j]50S ribosomal protein L14
X [auth l]Large ribosomal subunit protein uL16
Y [auth m]Large ribosomal subunit protein bL17
AA [auth o]Large ribosomal subunit protein bL19
CA [auth q]Large ribosomal subunit protein bL21
DA [auth r]Large ribosomal subunit protein uL22
EA [auth s]Large ribosomal subunit protein uL23
FA [auth t]50S ribosomal protein L24
GA [auth u]Large ribosomal subunit protein bL27
HA [auth v]Large ribosomal subunit protein bL28
JA [auth x]Large ribosomal subunit protein bL31
KA [auth y]Large ribosomal subunit protein bL32
LA [auth z]Large ribosomal subunit protein bL33A
I [auth B],
J [auth C],
K [auth D],
L [auth E]
50S ribosomal protein L7/L12
G [auth 8]tRNA-Phe---
E [auth 4]5S ribosomal RNA---
IA [auth w]Large ribosomal subunit protein uL29
BA [auth p]Large ribosomal subunit protein bL20
Z [auth n]Large ribosomal subunit protein uL18
W [auth k]Large ribosomal subunit protein uL15
U [auth i]Large ribosomal subunit protein uL13
T [auth h]Large ribosomal subunit protein uL11
Q [auth d]Large ribosomal subunit protein uL5
A [auth 0]Large ribosomal subunit protein bL34

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
B [auth 1]IPR021137Large ribosomal subunit protein bL35-likeFamily
B [auth 1]IPR018265Large ribosomal subunit protein bL35, conserved siteConserved Site
B [auth 1]IPR001706Large ribosomal subunit protein bL35Family
B [auth 1]IPR037229Large ribosomal subunit protein bL35 superfamilyHomologous Superfamily
C [auth 2]IPR000473Large ribosomal subunit protein bL36Family
C [auth 2]IPR035977Large ribosomal subunit protein bL36 superfamilyHomologous Superfamily
F [auth 7]IPR023584Ribosome recycling factor domainDomain
F [auth 7]IPR036191RRF superfamilyHomologous Superfamily
F [auth 7]IPR002661Ribosome recycling factorFamily
H [auth A]IPR005225Small GTP-binding domainDomain
H [auth A]IPR005517Translation elongation factor EFG/EF2, domain IVDomain
H [auth A]IPR004540Translation elongation factor EFG/EF2Family
H [auth A]IPR000795Translational (tr)-type GTP-binding domainDomain
H [auth A]IPR000640Elongation factor EFG, domain V-likeDomain
H [auth A]IPR031157Tr-type G domain, conserved siteConserved Site
H [auth A]IPR009022Elongation factor G, domain IIIDomain
H [auth A]IPR035647EF-G domain III/V-likeHomologous Superfamily
H [auth A]IPR041095Elongation Factor G, domain IIDomain
H [auth A]IPR004161Translation elongation factor EFTu-like, domain 2Domain
H [auth A]IPR047872Elongation factor G, domain IVDomain
H [auth A]IPR009000Translation protein, beta-barrel domain superfamilyHomologous Superfamily
H [auth A]IPR020568Ribosomal protein uS5 domain 2-type superfamilyHomologous Superfamily
H [auth A]IPR035649EFG, domain VDomain
H [auth A]IPR027417P-loop containing nucleoside triphosphate hydrolaseHomologous Superfamily
H [auth A]IPR014721Small ribosomal subunit protein uS5 domain 2-type fold, subgroupHomologous Superfamily
M [auth F]IPR043141Large ribosomal subunit protein uL10-like domain superfamilyHomologous Superfamily
M [auth F]IPR022973Large ribosomal subunit protein uL10, bacteriaFamily
M [auth F]IPR047865Large ribosomal subunit protein uL10, bacteria/organellaFamily
M [auth F]IPR002363Large ribosomal subunit protein uL10, conserved site, bacteriaConserved Site
M [auth F]IPR001790Large ribosomal subunit protein uL10, N-terminalDomain
N [auth a]IPR005880Large ribosomal subunit protein uL2, bacteria/organellaFamily
N [auth a]IPR022669Large ribosomal subunit protein uL2, C-terminalDomain
N [auth a]IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
N [auth a]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
N [auth a]IPR022671Large ribosomal subunit protein uL2, conserved siteConserved Site
N [auth a]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
N [auth a]IPR022666Large ribosomal subunit protein uL2, RNA-binding domainDomain
N [auth a]IPR014726Large ribosomal subunit protein uL2, domain 3Homologous Superfamily
N [auth a]IPR002171Large ribosomal subunit protein uL2Family
O [auth b]IPR019926Large ribosomal subunit protein uL3, conserved siteConserved Site
O [auth b]IPR019927Large ribosomal subunit protein uL3, bacteria/organellaFamily
O [auth b]IPR009000Translation protein, beta-barrel domain superfamilyHomologous Superfamily
O [auth b]IPR000597Large ribosomal subunit protein uL3Family
P [auth c]IPR013005Large ribosomal subunit protein uL4-likeFamily
P [auth c]IPR002136Large ribosomal subunit protein uL4Family
P [auth c]IPR023574Large ribosomal subunit protein uL4 domain superfamilyHomologous Superfamily
R [auth e]IPR020040Large ribosomal subunit protein uL6, alpha-beta domainDomain
R [auth e]IPR036789Large ribosomal subunit protein uL6-like, alpha-beta domain superfamilyHomologous Superfamily
R [auth e]IPR000702Large ribosomal subunit protein uL6-likeFamily
R [auth e]IPR019906Large ribosomal subunit protein uL6, bacteriaFamily
R [auth e]IPR002358Large ribosomal subunit protein uL6, conserved siteConserved Site
S [auth f]IPR009027Large ribosomal subunit protein bL9/RNase H1, N-terminalHomologous Superfamily
S [auth f]IPR020594Large ribosomal subunit protein bL9, bacteria/chloroplastFamily
S [auth f]IPR036935Large ribosomal subunit protein bL9, N-terminal domain superfamilyHomologous Superfamily
S [auth f]IPR036791Large ribosomal subunit protein bL9, C-terminal domain superfamilyHomologous Superfamily
S [auth f]IPR020069Large ribosomal subunit protein bL9, C-terminalDomain
S [auth f]IPR020070Large ribosomal subunit protein bL9, N-terminalDomain
S [auth f]IPR000244Large ribosomal subunit protein bL9Family
V [auth j]IPR036853Large ribosomal subunit protein uL14 superfamilyHomologous Superfamily
V [auth j]IPR000218Large ribosomal subunit protein uL14Family
V [auth j]IPR019972Large ribosomal subunit protein uL14, conserved siteConserved Site
V [auth j]IPR005745Large ribosomal subunit protein uL14, bacteriaFamily
X [auth l]IPR000114Large ribosomal subunit protein uL16, bacteriaFamily
X [auth l]IPR036920Large ribosomal subunit protein uL16 superfamilyHomologous Superfamily
X [auth l]IPR020798Large ribosomal subunit protein uL16, conserved siteConserved Site
X [auth l]IPR016180Large ribosomal subunit protein uL16 domainDomain
X [auth l]IPR047873Large ribosomal subunit protein uL16Family
Y [auth m]IPR036373Large ribosomal subunit protein bL17 superfamilyHomologous Superfamily
Y [auth m]IPR047859Large ribosomal subunit protein bL17, conserved siteConserved Site
Y [auth m]IPR000456Large ribosomal subunit protein bL17Family
AA [auth o]IPR001857Large ribosomal subunit protein bL19Family
AA [auth o]IPR038657Large ribosomal subunit protein bL19 superfamilyHomologous Superfamily
AA [auth o]IPR018257Large ribosomal subunit protein bL19, conserved siteConserved Site
AA [auth o]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
CA [auth q]IPR028909Large ribosomal subunit protein bL21-likeFamily
CA [auth q]IPR001787Large ribosomal subunit protein bL21Family
CA [auth q]IPR036164Large ribosomal subunit protein bL21-like superfamilyHomologous Superfamily
CA [auth q]IPR018258Large ribosomal subunit protein bL21, conserved siteConserved Site
DA [auth r]IPR018260Large ribosomal subunit protein uL22, conserved siteConserved Site
DA [auth r]IPR036394Ribosomal protein uL22 superfamilyHomologous Superfamily
DA [auth r]IPR001063Large ribosomal subunit protein uL22Family
DA [auth r]IPR005727Large ribosomal subunit protein uL22, bacterial/chloroplast-typeFamily
DA [auth r]IPR047867Large ribosomal subunit protein uL22, bacteria/organellaFamily
EA [auth s]IPR012678Ribosomal protein uL23/eL15/eS24 core domain superfamilyHomologous Superfamily
EA [auth s]IPR012677Nucleotide-binding alpha-beta plait domain superfamilyHomologous Superfamily
EA [auth s]IPR013025Large ribosomal subunit protein uL23-likeFamily
FA [auth t]IPR057264Large ribosomal subunit protein uL24, C-terminal domainDomain
FA [auth t]IPR003256Large ribosomal subunit protein uL24Family
FA [auth t]IPR041988Large ribosomal subunit protein uL24, KOW domainDomain
FA [auth t]IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
FA [auth t]IPR005824KOWDomain
FA [auth t]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
FA [auth t]IPR005825Large ribosomal subunit protein uL24, conserved siteConserved Site
GA [auth u]IPR001684Large ribosomal subunit protein bL27Family
GA [auth u]IPR018261Large ribosomal subunit protein bL27, conserved siteConserved Site
HA [auth v]IPR037147Large ribosomal subunit protein bL28 superfamilyHomologous Superfamily
HA [auth v]IPR050096Bacterial ribosomal protein bL28Family
HA [auth v]IPR001383Large ribosomal subunit protein bL28, bacteriaFamily
HA [auth v]IPR026569Large ribosomal subunit protein bL28Family
HA [auth v]IPR034704Large ribosomal subunit protein bL28/bL31-like superfamilyHomologous Superfamily
JA [auth x]IPR002150Large ribosomal subunit protein bL31 type A/BFamily
JA [auth x]IPR027491Large ribosomal subunit protein bL31 type AFamily
JA [auth x]IPR042105Large ribosomal subunit protein bL31 superfamilyHomologous Superfamily
JA [auth x]IPR034704Large ribosomal subunit protein bL28/bL31-like superfamilyHomologous Superfamily
KA [auth y]IPR002677Large ribosomal subunit protein bL32Family
KA [auth y]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
KA [auth y]IPR044957Large ribosomal subunit protein bL32, bacteriaFamily
LA [auth z]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
LA [auth z]IPR038584Large ribosomal subunit protein bL33 superfamilyHomologous Superfamily
LA [auth z]IPR001705Large ribosomal subunit protein bL33Family
LA [auth z]IPR018264Large ribosomal subunit protein bL33, conserved siteConserved Site
I [auth B],
J [auth C],
K [auth D],
L [auth E]
IPR008932Large ribosomal subunit protein bL12, oligomerizationDomain
I [auth B],
J [auth C],
K [auth D],
L [auth E]
IPR013823Large ribosomal subunit protein bL12, C-terminalDomain
I [auth B],
J [auth C],
K [auth D],
L [auth E]
IPR036235Large ribosomal subunit protein bL12, oligomerization domain superfamilyHomologous Superfamily
I [auth B],
J [auth C],
K [auth D],
L [auth E]
IPR014719Ribosomal protein bL12, C-terminal/adaptor protein ClpS-likeHomologous Superfamily
I [auth B],
J [auth C],
K [auth D],
L [auth E]
IPR000206Large ribosomal subunit protein bL12Family
IA [auth w]IPR050063Universal ribosomal protein uL29Family
IA [auth w]IPR001854Large ribosomal subunit protein uL29Family
IA [auth w]IPR036049Large ribosomal subunit protein uL29 superfamilyHomologous Superfamily
IA [auth w]IPR018254Large ribosomal subunit protein uL29, conserved siteConserved Site
BA [auth p]IPR049946Large ribosomal subunit protein bL20, conserved siteConserved Site
BA [auth p]IPR035566Ribosomal protein bL20, C-terminalHomologous Superfamily
BA [auth p]IPR005813Large ribosomal subunit protein bL20Family
Z [auth n]IPR005484Large ribosomal subunit protein uL18, bacterial/plantae/animaliaFamily
Z [auth n]IPR057268Large ribosomal subunit protein uL18Family
Z [auth n]IPR004389Large ribosomal subunit protein uL18, bacteriaFamily
W [auth k]IPR021131Large ribosomal subunit protein uL15/eL18Domain
W [auth k]IPR030878Large ribosomal subunit protein uL15Family
W [auth k]IPR036227Large ribosomal subunit protein uL15/eL18 superfamilyHomologous Superfamily
W [auth k]IPR063184Ribosomal protein uL15, N-terminal regionDomain
W [auth k]IPR005749Large ribosomal subunit protein uL15, bacteriaFamily
U [auth i]IPR023563Large ribosomal subunit protein uL13, conserved siteConserved Site
U [auth i]IPR005822Large ribosomal subunit protein uL13Family
U [auth i]IPR005823Large ribosomal subunit protein uL13, bacteriaFamily
U [auth i]IPR036899Large ribosomal subunit protein uL13 superfamilyHomologous Superfamily
T [auth h]IPR020785Large ribosomal subunit protein uL11, conserved siteConserved Site
T [auth h]IPR020783Large ribosomal subunit protein uL11, C-terminalDomain
T [auth h]IPR000911Ribosomal protein uL11Family
T [auth h]IPR036769Large ribosomal subunit protein uL11, C-terminal domain superfamilyHomologous Superfamily
T [auth h]IPR020784Large ribosomal subunit protein uL11, N-terminalDomain
T [auth h]IPR036796Large ribosomal subunit protein uL11, N-terminal domain superfamilyHomologous Superfamily
T [auth h]IPR006519Large ribosomal subunit protein uL11, bacteriaFamily
Q [auth d]IPR020929Large ribosomal subunit protein uL5, conserved siteConserved Site
Q [auth d]IPR022803Large ribosomal subunit protein uL5 domain superfamilyHomologous Superfamily
Q [auth d]IPR031309Large ribosomal subunit protein uL5, C-terminalDomain
Q [auth d]IPR031310Large ribosomal subunit protein uL5, N-terminalDomain
Q [auth d]IPR002132Large ribosomal subunit protein uL5Family
Q [auth d]IPR020930Large ribosomal subunit protein uL5, bacteriaFamily
A [auth 0]IPR020939Large ribosomal subunit protein bL34, conserved siteConserved Site
A [auth 0]IPR000271Large ribosomal subunit protein bL34Family