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Crystal Structure of FtsZ with Z228587394
Starting Model(s) Initial Refinement Model(s) Type Source Accession Code Details experimental model PDB 2Q1X initial MR model
Crystallization Crystalization Experiments ID Method pH Temperature Details ftsz-935 VAPOR DIFFUSION, SITTING DROP 5 294 0.1 M ammonium sulfate, 15.6% (w/v) PEG 3350, 0.1 M Bis-Tris pH 5.0.
Crystal Properties Matthews coefficient Solvent content 2.61 52.96
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 88.464 α = 90 b = 88.464 β = 90 c = 179.604 γ = 120
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol ftsz-935 ftsz-935 x-ray 100 PIXEL DECTRIS EIGER X 9M KB 2025-04-10 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline ftsz-935 SYNCHROTRON NSLS-II BEAMLINE 17-ID-1 0.92 NSLS-II 17-ID-1
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Rrim I (All) Rpim I (All) CC (Half) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot ftsz-935 2.091 44.232 100 0.265 0.276 0.076 0.995 7.9 13.3 46888
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Rrim I (All) Rpim I (All) CC (Half) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) ftsz-935 2.091 2.127 100 1.948 2.035 0.585 0.336 12.1
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (All) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT 2.091 44.271 46873 2389 99.942 0.193 0.1915 0.1985 0.2278 0.2332 34.329
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 0.045 0.022 0.045 -0.145
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_3_deg 14.513 r_dihedral_angle_6_deg 14.457 r_lrange_it 8.438 r_lrange_other 8.387 r_dihedral_angle_2_deg 7.196 r_scangle_it 6.823 r_scangle_other 6.822 r_dihedral_angle_1_deg 6.816 r_scbond_it 4.368 r_scbond_other 4.367
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_3_deg 14.513 r_dihedral_angle_6_deg 14.457 r_lrange_it 8.438 r_lrange_other 8.387 r_dihedral_angle_2_deg 7.196 r_scangle_it 6.823 r_scangle_other 6.822 r_dihedral_angle_1_deg 6.816 r_scbond_it 4.368 r_scbond_other 4.367 r_mcangle_it 4.251 r_mcangle_other 4.25 r_mcbond_it 2.8 r_mcbond_other 2.794 r_angle_refined_deg 1.641 r_angle_other_deg 0.591 r_symmetry_nbd_other 0.482 r_symmetry_nbd_refined 0.223 r_nbd_refined 0.221 r_nbd_other 0.205 r_xyhbond_nbd_refined 0.188 r_nbtor_refined 0.171 r_symmetry_xyhbond_nbd_refined 0.167 r_symmetry_nbtor_other 0.112 r_chiral_restr 0.075 r_symmetry_xyhbond_nbd_other 0.044 r_bond_refined_d 0.007 r_gen_planes_refined 0.006 r_bond_other_d 0.004 r_gen_planes_other 0.002
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 4230 Nucleic Acid Atoms Solvent Atoms 307 Heterogen Atoms 19
Software Software Software Name Purpose REFMAC refinement autoPROC data reduction Aimless data scaling XDS data reduction DIMPLE phasing PHASER phasing Coot model building gemmi data extraction