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NMR STRUCTURE OF VAT-N: THE N-TERMINAL DOMAIN OF VAT (VCP-LIKE ATPASE OF THERMOPLASMA)
SOLUTION NMR
NMR Experiment
Experiment
Type
Sample Contents
Solvent
Ionic Strength
pH
Pressure
Temperature (K)
Spectrometer
1
3D_13C-SEPARATED_NOESY
1.4 MM VAT-N U-15N,13C; 40 MM PHOSPHATE BUFFER NA; 90% H2O, 10% D2O
80 mM
5.9
AMBIENT
320
2
3D_CNH-NOESY
1.4 MM VAT-N U-15N,13C; 40 MM PHOSPHATE BUFFER NA; 90% H2O, 10% D2O
80 mM
5.9
AMBIENT
320
3
3D_NCH-NOESY
1.4 MM VAT-N U-15N,13C; 40 MM PHOSPHATE BUFFER NA; 90% H2O, 10% D2O
80 mM
5.9
AMBIENT
320
4
3D_CCH-NOESY
1.4 MM VAT-N U-15N,13C; 40 MM PHOSPHATE BUFFER NA; 90% H2O, 10% D2O
80 mM
5.9
AMBIENT
320
5
3D_15N-SEPARATED_NOESY
1.2 MM VAT-N U-15N; 40 MM PHOSPHATE BUFFER NA; 90% H2O, 10% D2O
80 mM
5.9
AMBIENT
320
6
3D_NNH-NOESY
1.2 MM VAT-N U-15N; 40 MM PHOSPHATE BUFFER NA; 90% H2O, 10% D2O
80 mM
5.9
AMBIENT
320
NMR Spectrometer Information
Spectrometer
Manufacturer
Model
Field Strength
1
Bruker
DMX
750
2
Bruker
DMX
600
NMR Refinement
Method
Details
Software
simulated annealing
STRUCTURES BASED ON 1923 DISTANCE RESTRAINTS; 1817 NOE BASED RESTRAINTS, 196
DIHEDRAL ANGLE RESTRAINTS, 56 J-COUPLING RESTRAINTS, 106 DISTANCE RESTRAINTS
FOR H-BONDS, 158 CA AND 148 CB CHEMICAL SHIFT RESTRAINTS. REFINED WITH A
CONFORMATIONAL DATABASE POTENTIAL
XwinNMR
NMR Ensemble Information
Conformer Selection Criteria
structures with the least restraint violations
Conformers Calculated Total Number
50
Conformers Submitted Total Number
25
Additional NMR Experimental Information
Details
THE STRUCTURE WAS DETERMINED USING TRIPLE-RESONANCE NMR SPECTROSCOPY. 3JHNHA
COUPLING-CONSTANTS FROM AN HNHA SPECTRUM