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Xylan-Binding Domain from CBM 22, formally x6b domain
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 4.6 CRYSTALS WERE GROWN FROM A PROTEIN CONCENTRATION OF 50 MG/ML IN 0.1 M NAAC BUFFER, PH 4.6, CONTAINING 10 MM DTT, 25 % (V/V) GLYCEROL AND WITH 12 % (W/V) PEG 8000 AS THE PRECIPITANT
Crystal Properties Matthews coefficient Solvent content 3.36 63.39
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 89.49 α = 90 b = 89.49 β = 90 c = 207.69 γ = 120
Symmetry Space Group P 61 2 2
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 IMAGE PLATE MARRESEARCH 1999-10-15 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON EMBL/DESY, HAMBURG BEAMLINE BW7B EMBL/DESY, HAMBURG BW7B
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) R Sym I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2.12 20 98 0.074 0.074 19.2 5.11 141380
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) R-Sym I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 2.12 2.2 96.5 0.437 0.437 3.4 4.6
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Free (Depositor) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MAD THROUGHOUT 2.1 10 27951 448 98.5 0.19 0.19 0.25 RANDOM
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3]
RMS Deviations Key Refinement Restraint Deviation p_transverse_tor 29.5 p_staggered_tor 14.9 p_planar_tor 4.5 p_scangle_it 2.6 p_mcangle_it 1.9 p_scbond_it 1.9 p_mcbond_it 1.4 p_multtor_nbd 0.233 p_singtor_nbd 0.183 p_chiral_restr 0.128
RMS Deviations Key Refinement Restraint Deviation p_transverse_tor 29.5 p_staggered_tor 14.9 p_planar_tor 4.5 p_scangle_it 2.6 p_mcangle_it 1.9 p_scbond_it 1.9 p_mcbond_it 1.4 p_multtor_nbd 0.233 p_singtor_nbd 0.183 p_chiral_restr 0.128 p_angle_d 0.036 p_planar_d 0.036 p_plane_restr 0.0124 p_bond_d 0.012 p_angle_deg p_hb_or_metal_coord p_xhyhbond_nbd p_xyhbond_nbd p_orthonormal_tor p_special_tor
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 2432 Nucleic Acid Atoms Solvent Atoms 297 Heterogen Atoms 2
Software Software Software Name Purpose REFMAC refinement DENZO data reduction SCALEPACK data scaling