1F81
SOLUTION STRUCTURE OF THE TAZ2 DOMAIN OF THE TRANSCRIPTIONAL ADAPTOR PROTEIN CBP
SOLUTION NMR
NMR Experiment | ||||||||
---|---|---|---|---|---|---|---|---|
Experiment | Type | Sample Contents | Solvent | Ionic Strength | pH | Pressure | Temperature (K) | Spectrometer |
1 | 3D_13C-separated_NOESY | 1.5 mM Taz2 | 25 mM deuterated acetate 0.1 mM ZnCl2 0.1 mM DTT pH 5.9 | 25 mM | 5.9 | 1 atm | 298 | |
2 | 3D_15N-separated_NOESY | 1.5 mM Taz2 | 25 mM deuterated acetate 0.1 mM ZnCl2 0.1 mM DTT pH 5.9 | 25 mM | 5.9 | 1 atm | 298 | |
3 | 4D_13C-separated_NOESY | 1.5 mM Taz2 | 25 mM deuterated acetate 0.1 mM ZnCl2 0.1 mM DTT pH 5.9 | 25 mM | 5.9 | 1 atm | 298 | |
4 | HNCA-J | 1.5 mM Taz2 | 25 mM deuterated acetate 0.1 mM ZnCl2 0.1 mM DTT pH 5.9 | 25 mM | 5.9 | 1 atm | 298 | |
5 | HNHA | 1.5 mM Taz2 | 25 mM deuterated acetate 0.1 mM ZnCl2 0.1 mM DTT pH 5.9 | 25 mM | 5.9 | 1 atm | 298 | |
6 | CBCA(CO)HN | 1.5 mM Taz2 | 25 mM deuterated acetate 0.1 mM ZnCl2 0.1 mM DTT pH 5.9 | 25 mM | 5.9 | 1 atm | 298 |
NMR Spectrometer Information | |||
---|---|---|---|
Spectrometer | Manufacturer | Model | Field Strength |
1 | Bruker | DMX | 600 |
2 | Bruker | AMX | 500 |
3 | Bruker | DRX | 750 |
NMR Refinement | ||
---|---|---|
Method | Details | Software |
distance geometry simulated annealing molecular dynamics matrix relaxation torsion angle dynamics | DYANA |
NMR Ensemble Information | |
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Conformer Selection Criteria | structures with acceptable covalent geometry,structures with favorable non-bond energy,structures with the least restraint violations,structures with the lowest energy,target function |
Conformers Calculated Total Number | 50 |
Conformers Submitted Total Number | 20 |
Representative Model | 20 (fewest violations,lowest energy) |
Computation: NMR Software | ||||
---|---|---|---|---|
# | Classification | Version | Software Name | Author |
1 | structure solution | DYANA | 1.5 | Peter Guntert |
2 | structure solution | Amber | 6 | Case, Pearlman, |
3 | processing | NMRPipe | 4 | Delaglio, Bax |
4 | refinement | Amber | 6 | Case, Pearlman, |