Find PDB structures and Computed Structure Models (CSM) by combining queries from tools in this suite: Attribute Search, Sequence Similarity, Sequence Motif, 3D Similarity, and 3D Motif with 'AND' logic.
OXIDIZED FORM OF FORMATE DEHYDROGENASE H FROM E. COLI
X-RAY DIFFRACTION
Crystallization
Crystalization Experiments
ID
Method
pH
Temperature
Details
1
vapor diffusion - hanging drop in anaerobic atmosphere
7.5
FDH-H WAS CRYSTALLIZED BY HANGING DROP VAPOR DIFFUSION IN AN ANAEROBIC ATMOSPHERE IN THE PRESENCE OF 1.5 M AMMONIUM SULFATE, 1% PEG 400, 20 MM SODIUM FORMATE AND 100 MM HEPES/NAOH AT PH 7.5. PRIOR TO FREEZING IN LIQUID NITROGEN, CRYSTALS WERE OXIDIZED BY SOAKING IN 10 MM BENZYL VIOLOGEN FOR 30 MINUTES., vapor diffusion - hanging drop in anaerobic atmosphere
Crystal Properties
Matthews coefficient
Solvent content
2.7
55
Crystal Data
Unit Cell
Length ( Å )
Angle ( ˚ )
a = 146.6
α = 90
b = 146.6
β = 90
c = 81.1
γ = 90
Symmetry
Space Group
P 41 21 2
Diffraction
Diffraction Experiment
ID #
Crystal ID
Scattering Type
Data Collection Temperature
Detector
Detector Type
Details
Collection Date
Monochromator
Protocol
1
1
x-ray
93
IMAGE PLATE
RIGAKU RAXIS
MIRRORS
1995-10-18
M
Radiation Source
ID #
Source
Type
Wavelength List
Synchrotron Site
Beamline
1
ROTATING ANODE
RIGAKU RUH2R
Data Collection
Overall
ID #
Resolution (High)
Resolution (Low)
Percent Possible (Observed)
R Merge I (Observed)
Net I Over Average Sigma (I)
Redundancy
Number Reflections (All)
Number Reflections (Observed)
Observed Criterion Sigma (F)
Observed Criterion Sigma (I)
B (Isotropic) From Wilson Plot
1
2.8
50
93.4
0.079
22.1
4
20861
1
Highest Resolution Shell
ID #
Resolution (High)
Resolution (Low)
Percent Possible (All)
Percent Possible (Observed)
R Merge I (Observed)
Mean I Over Sigma (Observed)
Redundancy
Number Unique Reflections (All)
1
2.8
2.9
91.4
0.2
8.4
Refinement
Statistics
Diffraction ID
Structure Solution Method
Cross Validation method
Resolution (High)
Resolution (Low)
Cut-off Sigma (F)
Number Reflections (Observed)
Number Reflections (R-Free)
Percent Reflections (Observed)
R-Factor (Observed)
R-Work (Depositor)
R-Free (Depositor)
R-Free (DCC)
R-Free Selection Details
Mean Isotropic B
X-RAY DIFFRACTION
DIFFERENCE FOURIER ANALYSIS USING PHASES FROM THE STRUCTURE OF REDUCED FDH-H (PDB ENTRY 1AA6)