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S954A mutant of the feruloyl esterase module from clostridium thermocellum complexed with ferulic acid
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 7.5 HEPES PH 7.5 100 MM, NA ACETATE 1M, CD ACETATE 50 MM, GLYCEROL 5%
Crystal Properties Matthews coefficient Solvent content 2.95 58
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 65.101 α = 90 b = 108.233 β = 90 c = 112.964 γ = 90
Symmetry Space Group P 21 21 21
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 120 CCD ADSC CCD MIRROR 2001-06-15 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON SRS BEAMLINE PX14.2 SRS PX14.2
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.4 20 99.6 0.048 33.5 5.2 148644
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 1.4 1.42 94.5 0.136 6.6 2.8
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT 1.4 19.92 148644 7782 99.6 0.144 0.143 0.16 0.1866 RANDOM
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3]
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_3_deg 3.692 r_scangle_it 2.655 r_scbond_it 1.728 r_angle_other_deg 1.418 r_mcangle_it 1.352 r_mcbond_it 0.847 r_nbtor_other 0.62 r_nbd_refined 0.613 r_nbd_other 0.334 r_metal_ion_refined 0.329
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_3_deg 3.692 r_scangle_it 2.655 r_scbond_it 1.728 r_angle_other_deg 1.418 r_mcangle_it 1.352 r_mcbond_it 0.847 r_nbtor_other 0.62 r_nbd_refined 0.613 r_nbd_other 0.334 r_metal_ion_refined 0.329 r_symmetry_vdw_refined 0.255 r_symmetry_vdw_other 0.221 r_symmetry_hbond_refined 0.218 r_xyhbond_nbd_refined 0.214 r_chiral_restr 0.106 r_bond_refined_d 0.01 r_gen_planes_refined 0.007 r_bond_other_d 0.006 r_gen_planes_other 0.006 r_xyhbond_nbd_other 0.002 r_angle_refined_deg r_dihedral_angle_1_deg r_dihedral_angle_2_deg r_dihedral_angle_4_deg r_nbtor_refined r_metal_ion_other r_symmetry_hbond_other r_symmetry_metal_ion_refined r_symmetry_metal_ion_other r_mcbond_other r_mcangle_other r_scbond_other r_scangle_other r_long_range_B_refined r_long_range_B_other r_rigid_bond_restr r_sphericity_free r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 4570 Nucleic Acid Atoms Solvent Atoms 751 Heterogen Atoms 72
Software Software Software Name Purpose REFMAC refinement DENZO data reduction SCALEPACK data scaling AMoRE phasing