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Structure of bovine Acyl-CoA binding protein in orthorhombic crystal form
Starting Model(s) Initial Refinement Model(s) Type Source Accession Code Details experimental model PDB 2ABD PDB ENTRY 2ABD
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 7.5 15% PEG8000, 5MMCDCL2, 10MM HEPES PH7.5, pH 7.50
Crystal Properties Matthews coefficient Solvent content 2.4 47.99
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 26.05 α = 90 b = 54.78 β = 90 c = 65.83 γ = 90
Symmetry Space Group P 21 21 21
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 293 AREA DETECTOR MULTIWIRE UCSD 1991-08-15 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 ROTATING ANODE RIGAKU
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2 19 94.9 0.04 32 3.7 6473 20.9
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 2 2.15 91.2 0.076 9.3 2.1
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Starting model Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT PDB ENTRY 2ABD 2 19.14 6394 647 94.4 0.2 0.2 0.2006 0.226 0.2268 RANDOM 26.2
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 2.83 -2.9 0.08
RMS Deviations Key Refinement Restraint Deviation c_dihedral_angle_d 17.3 c_scangle_it 4.63 c_scbond_it 3.14 c_mcangle_it 2.13 c_mcbond_it 1.46 c_angle_deg 0.8 c_improper_angle_d 0.65 c_bond_d 0.005 c_bond_d_na c_bond_d_prot
RMS Deviations Key Refinement Restraint Deviation c_dihedral_angle_d 17.3 c_scangle_it 4.63 c_scbond_it 3.14 c_mcangle_it 2.13 c_mcbond_it 1.46 c_angle_deg 0.8 c_improper_angle_d 0.65 c_bond_d 0.005 c_bond_d_na c_bond_d_prot c_angle_d c_angle_d_na c_angle_d_prot c_angle_deg_na c_angle_deg_prot c_dihedral_angle_d_na c_dihedral_angle_d_prot c_improper_angle_d_na c_improper_angle_d_prot
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 698 Nucleic Acid Atoms Solvent Atoms 60 Heterogen Atoms 1
Software Software Software Name Purpose CNS refinement UCSD data reduction UCSD data scaling AMoRE phasing