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LYSOZYME (MUCOPEPTIDE N-ACETYLMURAMYL HYDROLASE)
Starting Model(s) Initial Refinement Model(s) Type Source Accession Code Details experimental model Other NATIVE ORTHORHOMBIC FORM
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 9.6 pH 9.6
Crystal Properties Matthews coefficient Solvent content 2.03 16.9
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 30.496 α = 90 b = 55.387 β = 90 c = 68.854 γ = 90
Symmetry Space Group P 21 21 21
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 293 IMAGE PLATE 1997-05-11 M
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2 30 92.13 0.0571 26.93 4.65 7683 23.1
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 2 2.1 90.1 0.301 4.19 4.6
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Starting model Resolution (High) Resolution (Low) Cut-off Sigma (F) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT NATIVE ORTHORHOMBIC FORM 2 10 2 5320 278 64.4 0.199 0.199 0.1929 0.291 RANDOM 25.8
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3]
RMS Deviations Key Refinement Restraint Deviation x_dihedral_angle_d 25.4 x_scangle_it 5.58 x_scbond_it 3.8 x_mcangle_it 3.22 x_mcbond_it 2.12 x_angle_deg 1.8 x_improper_angle_d 1.64 x_bond_d 0.016 x_bond_d_na x_bond_d_prot
RMS Deviations Key Refinement Restraint Deviation x_dihedral_angle_d 25.4 x_scangle_it 5.58 x_scbond_it 3.8 x_mcangle_it 3.22 x_mcbond_it 2.12 x_angle_deg 1.8 x_improper_angle_d 1.64 x_bond_d 0.016 x_bond_d_na x_bond_d_prot x_angle_d x_angle_d_na x_angle_d_prot x_angle_deg_na x_angle_deg_prot x_dihedral_angle_d_na x_dihedral_angle_d_prot x_improper_angle_d_na x_improper_angle_d_prot
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 1001 Nucleic Acid Atoms Solvent Atoms 136 Heterogen Atoms
Software Software Software Name Purpose XDS data scaling X-PLOR model building X-PLOR refinement XDS data reduction X-PLOR phasing