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Structure of the C-domain of Human Cardiac Troponin C in Complex with Ca2+ Sensitizer EMD 57033
SOLUTION NMR
NMR Experiment
Experiment
Type
Sample Contents
Solvent
Ionic Strength
pH
Pressure
Temperature (K)
Spectrometer
1
HNHA
~1mM C-domain of Cardiac Troponin C.
100mM KCl
10mM Imidazole
1mM DSS
~1mM EMD 57033
trace DMSO-d6
90% H2O/10% D2O
0.1
6.7
ambient
303
2
HNHB
~1mM C-domain of Cardiac Troponin C.
100mM KCl
10mM Imidazole
1mM DSS
~1mM EMD 57033
trace DMSO-d6
90% H2O/10% D2O
0.1
6.7
ambient
303
3
3D-13C/15N-NOESY
~1mM C-domain of Cardiac Troponin C.
100mM KCl
10mM Imidazole
1mM DSS
~1mM EMD 57033
trace DMSO-d6
90% H2O/10% D2O
0.1
6.7
ambient
303
4
HCCHTOCSY
~1mM C-domain of Cardiac Troponin C.
100mM KCl
10mM Imidazole
1mM DSS
~1mM EMD 57033
trace DMSO-d6
90% H2O/10% D2O
0.1
6.7
ambient
303
5
3D_15N-separated_NOESY
~1mM C-domain of Cardiac Troponin C.
100mM KCl
10mM Imidazole
1mM DSS
~1mM EMD 57033
trace DMSO-d6
90% H2O/10% D2O
0.1
6.7
ambient
303
6
HNCACB
~1mM C-domain of Cardiac Troponin C.
100mM KCl
10mM Imidazole
1mM DSS
~1mM EMD 57033
trace DMSO-d6
90% H2O/10% D2O
0.1
6.7
ambient
303
NMR Spectrometer Information
Spectrometer
Manufacturer
Model
Field Strength
1
Varian
Unity Inova
500
2
Varian
UNITY
600
3
Varian
UNITYPLUS
800
NMR Refinement
Method
Details
Software
simulated annealing
~1000 NOE restraints were used.
61 dihedral restraints as well as 14 NOE restraints between drug and protein.
X-PLOR
NMR Ensemble Information
Conformer Selection Criteria
all calculated structures submitted
Conformers Calculated Total Number
30
Conformers Submitted Total Number
30
Representative Model
11 (closest to the minimized average structure)
Additional NMR Experimental Information
Details
The structure of the protein was determined using multidimensional NMR spectroscopy.
The structure of EMD 57033 in the complex was determined using 15N/13C-filtered-NOESY
and DIPSI experiments.
The contacts between protein and EMD 57033 were determined using 15N/13C-filtered/edited experiments.