1L3Y
INTEGRIN EGF-LIKE MODULE 3 FROM THE BETA-2 SUBUNIT
SOLUTION NMR
NMR Experiment | ||||||||
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Experiment | Type | Sample Contents | Solvent | Ionic Strength | pH | Pressure | Temperature (K) | Spectrometer |
1 | 3D_15N-separated_NOESY | 1 mM I-EGF3 U-15N, 5 mM NaPO4 | 90% H2O/10% D2O | 5mM NaPO4 | 6.2 | ambient | 298 | |
2 | 3D_15N-separated_TOCSY | 1 mM I-EGF3 U-15N, 5 mM NaPO4 | 90% H2O/10% D2O | 5mM NaPO4 | 6.2 | ambient | 298 | |
3 | HMQC-J | 1 mM I-EGF3 U-15N, 5 mM NaPO4 | 90% H2O/10% D2O | 5mM NaPO4 | 6.2 | ambient | 298 | |
4 | 1H-NOESY | 1 mM I-EGF3, 5 mM NaPO4 | 100% D2O | 5mM NaPO4 | 6.2 | ambient | 298 | |
5 | 1H-TOCSY | 1 mM I-EGF3, 5 mM NaPO4 | 100% D2O | 5mM NaPO4 | 6.2 | ambient | 298 | |
6 | DQF-COSY | 1 mM I-EGF3, 5 mM NaPO4 | 100% D2O | 5mM NaPO4 | 6.2 | ambient | 298 |
NMR Spectrometer Information | |||
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Spectrometer | Manufacturer | Model | Field Strength |
1 | Bruker | DRX | 600 |
NMR Refinement | ||
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Method | Details | Software |
simulated annealing | Gifa |
NMR Ensemble Information | |
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Conformer Selection Criteria | structures with acceptable covalent geometry,structures with the lowest energy |
Conformers Calculated Total Number | 100 |
Conformers Submitted Total Number | 15 |
Representative Model | 1 (lowest energy) |
Computation: NMR Software | ||||
---|---|---|---|---|
# | Classification | Version | Software Name | Author |
1 | processing | Gifa | 4.3 | Delsuc, M.A. |
2 | data analysis | XEASY | 1.3.13 | Wuthrich, K. |
3 | structure solution | CNS | 1.0 | Brunger, A |
4 | refinement | CNS | 1.0 | Brunger, A |