1M62
Solution structure of the BAG domain from BAG4/SODD
SOLUTION NMR
NMR Experiment | ||||||||
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Experiment | Type | Sample Contents | Solvent | Ionic Strength | pH | Pressure | Temperature (K) | Spectrometer |
1 | 3D 13C/15N-separated NOESY | 1.5 mM BAG4 BD U-15N 13C, 10 mM potassium phosphate buffer pH 7.2, 100 mM KCl, 1 mM DTT, 1 mM EDTA | 90% H2O/10% D2O | 0.12 | 7.2 | ambient | 303 | |
2 | 3D_15N-separated_NOESY | 1.5 mM BAG4 BD U-15N, 10 mM potassium phosphate buffer pH 7.2, 100 mM KCl, 1 mM DTT, 1 mM EDTA | 90% H2O/10% D2O | 0.12 | 7.2 | ambient | 303 | |
3 | 3D CBCA(CO)NH | 1.5 mM BAG4 BD U-15N 13C, 10 mM potassium phosphate buffer pH 7.2, 100 mM KCl, 1 mM DTT, 1 mM EDTA | 90% H2O/10% D2O | 0.12 | 7.2 | ambient | 303 | |
4 | 3D HNCACB | 1.5 mM BAG4 BD U-15N 13C, 10 mM potassium phosphate buffer pH 7.2, 100 mM KCl, 1 mM DTT, 1 mM EDTA | 90% H2O/10% D2O | 0.12 | 7.2 | ambient | 303 | |
5 | 3D H(CCO)NH | 1.5 mM BAG4 BD U-15N 13C, 10 mM potassium phosphate buffer pH 7.2, 100 mM KCl, 1 mM DTT, 1 mM EDTA | 90% H2O/10% D2O | 0.12 | 7.2 | ambient | 303 | |
6 | 3D C(CO)NH | 1.5 mM BAG4 BD U-15N 13C, 10 mM potassium phosphate buffer pH 7.2, 100 mM KCl, 1 mM DTT, 1 mM EDTA | 90% H2O/10% D2O | 0.12 | 7.2 | ambient | 303 | |
7 | 3D HNCO | 1.5 mM BAG4 BD U-15N 13C, 10 mM potassium phosphate buffer pH 7.2, 100 mM KCl, 1 mM DTT, 1 mM EDTA | 90% H2O/10% D2O | 0.12 | 7.2 | ambient | 303 |
NMR Spectrometer Information | |||
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Spectrometer | Manufacturer | Model | Field Strength |
1 | Varian | UNITYPLUS | 500 |
2 | Varian | INOVA | 600 |
3 | Varian | INOVA | 750 |
NMR Refinement | ||
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Method | Details | Software |
torsion angle dynamics | VNMR |
NMR Ensemble Information | |
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Conformer Selection Criteria | structures with the least restraint violations,structures with the lowest energy |
Conformers Calculated Total Number | 28 |
Conformers Submitted Total Number | 25 |
Representative Model | 1 (lowest energy) |
Computation: NMR Software | ||||
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# | Classification | Version | Software Name | Author |
1 | collection | VNMR | 6.1C | Varian Inc. |
2 | processing | Felix | 2000 | MSI/Accelrys Inc. |
3 | data analysis | Felix | 2000 | MSI/Accelrys Inc. |
4 | structure solution | CNS | 1.0 | Brunger et al. |
5 | refinement | CNS | 1.0 | Brunger et al. |