1M8O
Platelet integrin alfaIIb-beta3 cytoplasmic domain
SOLUTION NMR
NMR Experiment | ||||||||
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Experiment | Type | Sample Contents | Solvent | Ionic Strength | pH | Pressure | Temperature (K) | Spectrometer |
1 | filtered 2D-NOESY for intermolecular NOEs | 1mM 15N/13C MBP-beta3, 1.3 mM unlabeled alfaIIb, | 20 mM phosphate buffer pH6.3 5mM Ca | 6.3 | ||||
2 | filtered 2D-NOESY for intermolecular NOEs | 1mM 15N/13C MBP-alfaiib, 1.3 mM unlabeled beta3, | 20 mM phosphate buffer pH6.3 5mM Ca | |||||
3 | 2D-NOESY for transferred NOEs | 1mM unlabeled alfaIIB, 0.1 mM unlabeled MBP-beta3, 0.2 mM unlabeled talin head domain | 20 mM phosphate buffer pH6.3 5mM Ca |
NMR Spectrometer Information | |||
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Spectrometer | Manufacturer | Model | Field Strength |
1 | Varian | INOVA | 500 |
NMR Refinement | ||
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Method | Details | Software |
simulated annealing | X-PLOR(Version 3.2) | VNMR |
NMR Ensemble Information | |
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Conformer Selection Criteria | structures with favorable non-bond energy |
Conformers Calculated Total Number | 20 |
Conformers Submitted Total Number | 20 |
Representative Model | 1 (minimized average structure) |
Computation: NMR Software | ||||
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# | Classification | Version | Software Name | Author |
1 | collection | VNMR | 6 | Varian |
2 | processing | NMRPipe | 2.1 | Delagio |
3 | data analysis | PIPP | 4.2.5 | Garrett |
4 | structure solution | X-PLOR | 3.2 | Brunger |
5 | refinement | X-PLOR | 3.2 | Brunger |