1MR0
SOLUTION NMR STRUCTURE OF AGRP(87-120; C105A)
SOLUTION NMR
NMR Experiment | ||||||||
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Experiment | Type | Sample Contents | Solvent | Ionic Strength | pH | Pressure | Temperature (K) | Spectrometer |
1 | 2D-NOESY | 1.7 MM AGRP(87-120 NATURAL ABUNDANCE OF ALL NUCLEI. | pH 5.0 20 mM PERDEUTERATED ACETIC ACID | 20 mM PERDEUTERATED ACETIC ACID | 5.0 | 1 atm | 288 | |
2 | DQF-COSY | 1.7 MM AGRP(87-120 NATURAL ABUNDANCE OF ALL NUCLEI. | pH 5.0 20 mM PERDEUTERATED ACETIC ACID | 20 mM PERDEUTERATED ACETIC ACID | 5.0 | 1 atm | 288 | |
3 | TOCSY | 1.7 MM AGRP(87-120 NATURAL ABUNDANCE OF ALL NUCLEI. | pH 5.0 20 mM PERDEUTERATED ACETIC ACID | 20 mM PERDEUTERATED ACETIC ACID | 5.0 | 1 atm | 288 | |
4 | TOCSY(HX) | 1.6 MM AGRP(87-120; C105A), NATURAL ABUNDANCE OF ALL NUCLEI. | pH 4.0 200 mM PERDEUTERATED ACETIC ACID | 200 mM PERDEUTERATED ACETIC ACID | 4.0 | 1 atm | 288 |
NMR Spectrometer Information | |||
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Spectrometer | Manufacturer | Model | Field Strength |
1 | Varian | UNITYPLUS | 800 |
2 | Varian | UNITYPLUS | 500 |
NMR Refinement | ||
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Method | Details | Software |
torsion angle dynamics | STRUCTURE CALCULATIONS WERE ASSISTED WITH AUTOMATED ASSIGNMENT. FINAL STRUCTURES WERE CALCULATED USING 602 NOE-BASED UPPER LIMIT RESTRAINTS AND 23 ALPHA-TO- AMIDE 3-BOND J-COUPLING CONSTANTS. | VNMR |
NMR Ensemble Information | |
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Conformer Selection Criteria | target function |
Conformers Calculated Total Number | 1000 |
Conformers Submitted Total Number | 40 |
Representative Model | 1 (lowest target function) |
Additional NMR Experimental Information | |
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Details | THE NOESY, TOCSY AND DQF-COSY EXPERIMENTS WERE PERFORMED AT 800 MHZ; THE HX STUDY WAS CONDUCTED AT 500 MHZ. |
Computation: NMR Software | ||||
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# | Classification | Version | Software Name | Author |
1 | collection | VNMR | 6.1B | Krish Krishamurthy, Evan Williams, Steve Cheathum, Frtis Vosman, Dan Iverson, Michael Carlisle, Dan Steele, James Welch |
2 | processing | MNMR | 940501 | Department of Chemistry,Carlsberg Laboratory, Copenhagen, Denmark |
3 | structure solution | DYANA | 1.5 | Guntert, P., Mumenthaler, C., and Wuthrich, K. |
4 | data analysis | XEASY | 1.2 | Bartels, C., Xia, T. H., Billeter, M., Guntert, P., and Wuthrich, K. |
5 | refinement | DYANA | 1.5 | Guntert, P., Mumenthaler, C., and Wuthrich, K. |