1NRO

CRYSTALLOGRAPHIC STRUCTURES OF THROMBIN COMPLEXED WITH THROMBIN RECEPTOR PEPTIDES: EXISTENCE OF EXPECTED AND NOVEL BINDING MODES


X-RAY DIFFRACTION

Crystallization

Crystal Properties
Matthews coefficientSolvent content
2.7555.23

Crystal Data

Unit Cell
Length ( Å )Angle ( ˚ )
a = 128.1α = 90
b = 51.8β = 101
c = 62.9γ = 90
Symmetry
Space GroupC 1 2 1

Diffraction

Diffraction Experiment
ID #Crystal IDScattering TypeData Collection TemperatureDetectorDetector TypeDetailsCollection DateMonochromatorProtocol
11x-ray

Refinement

Statistics
Diffraction IDStructure Solution MethodResolution (High)Resolution (Low)Cut-off Sigma (F)Number Reflections (Observed)Number Reflections (R-Free)Percent Reflections (Observed)R-Factor (Observed)R-WorkR-FreeMean Isotropic B
X-RAY DIFFRACTION3.17245720.171
Temperature Factor Modeling
Anisotropic B[1][1]Anisotropic B[1][2]Anisotropic B[1][3]Anisotropic B[2][2]Anisotropic B[2][3]Anisotropic B[3][3]
RMS Deviations
KeyRefinement Restraint Deviation
p_orthonormal_tor30.4
p_staggered_tor23.3
p_planar_tor2
p_scangle_it1.55
p_mcangle_it1.19
p_scbond_it0.93
p_mcbond_it0.66
p_xhyhbond_nbd0.4
p_multtor_nbd0.37
p_singtor_nbd0.26
RMS Deviations
KeyRefinement Restraint Deviation
p_orthonormal_tor30.4
p_staggered_tor23.3
p_planar_tor2
p_scangle_it1.55
p_mcangle_it1.19
p_scbond_it0.93
p_mcbond_it0.66
p_xhyhbond_nbd0.4
p_multtor_nbd0.37
p_singtor_nbd0.26
p_chiral_restr0.14
p_planar_d0.048
p_angle_d0.045
p_bond_d0.014
p_plane_restr0.013
p_angle_deg
p_hb_or_metal_coord
p_xyhbond_nbd
p_transverse_tor
p_special_tor
Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen AtomsNumber
Protein Atoms2364
Nucleic Acid Atoms
Solvent Atoms117
Heterogen Atoms

Software

Software
Software NamePurpose
PROLSQrefinement