1O6W
Solution Structure of the Prp40 WW Domain Pair of the Yeast Splicing Factor Prp40
SOLUTION NMR
NMR Experiment | ||||||||
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Experiment | Type | Sample Contents | Solvent | Ionic Strength | pH | Pressure | Temperature (K) | Spectrometer |
1 | 13C-NOESY | 1.5 MM 15N- OR 13C,15N | 20MM NA PHOSPHATE, 30MM NACL | 6.3 | 1 atm | 295 | ||
2 | 15N-NOESY | 1.5 MM 15N- OR 13C,15N | 20MM NA PHOSPHATE, 30MM NACL | 6.3 | 1 atm | 295 | ||
3 | S3CT | 1.5 MM 15N- OR 13C,15N | 20MM NA PHOSPHATE, 30MM NACL | 6.3 | 1 atm | 295 | ||
4 | HNCG | 1.5 MM 15N- OR 13C,15N | 20MM NA PHOSPHATE, 30MM NACL | 6.3 | 1 atm | 295 | ||
5 | HNHA-J | 1.5 MM 15N- OR 13C,15N | 20MM NA PHOSPHATE, 30MM NACL | 6.3 | 1 atm | 295 |
NMR Spectrometer Information | |||
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Spectrometer | Manufacturer | Model | Field Strength |
1 | Bruker | DRX | 500 |
2 | Bruker | DRX | 600 |
NMR Refinement | ||
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Method | Details | Software |
AMBIGUOUS DISTANCE RESTRAINTS SIMULATED ANNEALING WIT TORSION ANGLE DYNAMICS AS IMPLEMENTED IN ARIA1.0 | REFINEMENT DETAILS CAN BE FOUND IN THE JRNL CITATION ABOVE. | ARIA |
NMR Ensemble Information | |
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Conformer Selection Criteria | STRUCTURES WITH ACCEPTABLE COVALEN GEOMETRY, STRUCTURES WITH FAVORABL NON-BOND ENERGY |
Conformers Calculated Total Number | 20 |
Conformers Submitted Total Number | 7 |
Representative Model | 1 (n/a) |
Additional NMR Experimental Information | |
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Details | THE STRUCTURE WAS DETERMINED USING STANDARD TRIPLE-RESONANCE NMR SPECTROSCOPY ON 13C,15N-LABELED PRP40 1-75. RESIDUAL DIPOLAR COUPLINGS WERE MEASURED TO INCREASE THE CONVERGENCE OF THE SET OF STUCTURES CALCULATED. |
Computation: NMR Software | ||||
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# | Classification | Version | Software Name | Author |
1 | refinement | ARIA | NILGES, M. | |
2 | structure solution | XEASY | ||
3 | structure solution | NMRView | ||
4 | structure solution | PIPP/ CAPP | CAPP | |
5 | structure solution | ARIA | ||
6 | structure solution | CNS |