1Q71

The structure of microcin J25 is a threaded sidechain-to-backbone ring structure and not a head-to-tail cyclized backbone


SOLUTION NMR
NMR Experiment
ExperimentTypeSample ContentsSolventIonic StrengthpHPressureTemperature (K)Spectrometer
12D TOCSY0.3 mg of microcin J25100% CD3OH0ambient298
22D NOESY0.3 mg of microcin J25100% CD3OH0ambient298
3E-COSY0.3 mg of microcin J25100% CD3OH0ambient298
NMR Spectrometer Information
SpectrometerManufacturerModelField Strength
1BrukerDMX750
2BrukerAvance500
NMR Refinement
MethodDetailsSoftware
Structures were calculated by torsion angle dynamics and refined in a water shell using Cartesian dynamics within CNS.Preliminary structures were generated by torsion angle dynamics using CNS. Structures were subsequently subjected to further molecular dynamics and energy minimisation in a water shell using protocols from ARIA within CNS.XWINNMR
NMR Ensemble Information
Conformer Selection Criteriastructures with the least restraint violations,structures with the lowest energy
Conformers Calculated Total Number50
Conformers Submitted Total Number20
Representative Model1 (lowest energy)
Additional NMR Experimental Information
DetailsThis structure was determined using standard 2D homonuclear techniques.
Computation: NMR Software
#ClassificationVersionSoftware NameAuthor
1collectionXWINNMR3.1Bruker
2data analysisXEASY1.3.7Eccles, C., Guntert, P., Billeter, M. and Wuthrich, K.
3structure solutionDYANA1.5Guntert, P., Mumenthaler, C. and Wuthrich, K.
4refinementCNS1.0Brunger, A.T. et al.