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Crystal Structure of resisitin
Starting Model(s) Initial Refinement Model(s) Type Source Accession Code Details experimental model PDB 1RFX
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, HANGING DROP 5.5 277 40% MPD, 8% PEG 5000MME, 0.2M MgCl2, 0.1M Na Acetate pH 5.5, VAPOR DIFFUSION, HANGING DROP, temperature 277K
Crystal Properties Matthews coefficient Solvent content 2.02 38.6
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 49.021 α = 90 b = 52.475 β = 96.53 c = 96.609 γ = 90
Symmetry Space Group C 1 2 1
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 110 CCD MACSCIENCE 2000-12-02 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON APS BEAMLINE 31-ID 1.0542517 APS 31-ID
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.787 20 98.4 0.083 11.3 17.3 23080 21591 -3
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 1.787 1.86 100 0.249 4.6
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Starting model Resolution (High) Resolution (Low) Number Reflections (All) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (All) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT 1RFX 1.787 17.82 21591 21591 1087 97.74 0.20577 0.20577 0.20377 0.211 0.24494 0.2461 RANDOM 26.408
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 0.23 -0.01 -0.47 0.24
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 35.811 r_dihedral_angle_3_deg 13.948 r_dihedral_angle_4_deg 13.693 r_dihedral_angle_1_deg 6.19 r_angle_refined_deg 1.844 r_scangle_it 1.609 r_scbond_it 1.167 r_mcangle_it 0.992 r_angle_other_deg 0.785 r_mcbond_it 0.66
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 35.811 r_dihedral_angle_3_deg 13.948 r_dihedral_angle_4_deg 13.693 r_dihedral_angle_1_deg 6.19 r_angle_refined_deg 1.844 r_scangle_it 1.609 r_scbond_it 1.167 r_mcangle_it 0.992 r_angle_other_deg 0.785 r_mcbond_it 0.66 r_symmetry_vdw_refined 0.268 r_symmetry_vdw_other 0.241 r_nbd_other 0.202 r_nbd_refined 0.2 r_symmetry_hbond_refined 0.174 r_xyhbond_nbd_refined 0.119 r_nbtor_other 0.087 r_mcbond_other 0.072 r_chiral_restr 0.07 r_bond_refined_d 0.008 r_bond_other_d 0.007 r_gen_planes_refined 0.003 r_gen_planes_other 0.001 r_nbtor_refined r_xyhbond_nbd_other r_metal_ion_refined r_metal_ion_other r_symmetry_hbond_other r_rigid_bond_restr r_sphericity_free r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 2000 Nucleic Acid Atoms Solvent Atoms 179 Heterogen Atoms
Software Software Software Name Purpose DENZO data reduction SCALEPACK data scaling AMoRE phasing REFMAC refinement