X-RAY DIFFRACTION

Crystallization

Crystalization Experiments
IDMethodpHTemperatureDetails
1VAPOR DIFFUSION, SITTING DROP4.629830% PEG 2000 MME, 0.1M Ammonium Acetate, 0.2M Ammonium Sulfate, pH 4.6, VAPOR DIFFUSION, SITTING DROP, temperature 298K
Crystal Properties
Matthews coefficientSolvent content
2.8256.44

Crystal Data

Unit Cell
Length ( Å )Angle ( ˚ )
a = 95.662α = 90
b = 95.662β = 90
c = 115.215γ = 120
Symmetry
Space GroupP 32 2 1

Diffraction

Diffraction Experiment
ID #Crystal IDScattering TypeData Collection TemperatureDetectorDetector TypeDetailsCollection DateMonochromatorProtocol
11x-ray100CCDADSC QUANTUM 4MSINGLE WAVELENGTH
Radiation Source
ID #SourceTypeWavelength ListSynchrotron SiteBeamline
1SYNCHROTRONESRF BEAMLINE ID14-40.9793ESRFID14-4

Data Collection

Overall
ID #Resolution (High)Resolution (Low)Percent Possible (Observed)R Merge I (Observed)Net I Over Average Sigma (I)RedundancyNumber Reflections (All)Number Reflections (Observed)Observed Criterion Sigma (F)Observed Criterion Sigma (I)B (Isotropic) From Wilson Plot
12.53099.80.05928.052155421513
Highest Resolution Shell
ID #Resolution (High)Resolution (Low)Percent Possible (All)Percent Possible (Observed)R Merge I (Observed)Mean I Over Sigma (Observed)RedundancyNumber Unique Reflections (All)
2.52.591000.3123.5762120

Refinement

Statistics
Diffraction IDStructure Solution MethodCross Validation methodResolution (High)Resolution (Low)Number Reflections (All)Number Reflections (Observed)Number Reflections (R-Free)Percent Reflections (Observed)R-Factor (All)R-WorkR-FreeR-Free Selection DetailsMean Isotropic B
X-RAY DIFFRACTIONSADTHROUGHOUT2.528.1632156120414112299.880.243360.241130.28619RANDOM38.414
Temperature Factor Modeling
Anisotropic B[1][1]Anisotropic B[1][2]Anisotropic B[1][3]Anisotropic B[2][2]Anisotropic B[2][3]Anisotropic B[3][3]
1.90.951.9-2.85
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_3_deg27.039
r_scangle_it5.327
r_dihedral_angle_1_deg4.759
r_scbond_it3.477
r_angle_refined_deg2.552
r_mcangle_it1.847
r_mcbond_it1.015
r_metal_ion_refined0.527
r_symmetry_hbond_refined0.364
r_nbd_refined0.336
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_3_deg27.039
r_scangle_it5.327
r_dihedral_angle_1_deg4.759
r_scbond_it3.477
r_angle_refined_deg2.552
r_mcangle_it1.847
r_mcbond_it1.015
r_metal_ion_refined0.527
r_symmetry_hbond_refined0.364
r_nbd_refined0.336
r_symmetry_vdw_refined0.268
r_xyhbond_nbd_refined0.246
r_chiral_restr0.162
r_bond_refined_d0.026
r_gen_planes_refined0.009
Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen AtomsNumber
Protein Atoms3594
Nucleic Acid Atoms
Solvent Atoms142
Heterogen Atoms7

Software

Software
Software NamePurpose
REFMACrefinement
DENZOdata reduction
SCALEPACKdata scaling
SOLVEphasing