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Crystal Structure Analysis of Bovine Bc1 with UHDBT
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION 7.2 277 20mM ammonium acetate, 20% glycerol, 12% PEG4000,
0.5M KCl, 0.1% diheptanoyl-phosphatidylcholine, pH 7.2, VAPOR DIFFUSION, temperature 277K
Crystal Properties Matthews coefficient Solvent content 3.6 65.87
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 153.672 α = 90 b = 153.672 β = 90 c = 589.219 γ = 90
Symmetry Space Group I 41 2 2
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD ADSC QUANTUM 4 mirrors 2002-01-08 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON APS BEAMLINE 17-ID 1.2 APS 17-ID
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2.85 50 70581 68441 -0.5
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (All) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (All) R-Factor (Observed) R-Work (Depositor) R-Free (Depositor) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION FOURIER SYNTHESIS THROUGHOUT 2.85 40 68441 68441 2124 85.46 0.2191 0.2191 0.21698 0.28495 RANDOM 34.742
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 2.22 2.22 -4.43
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_1_deg 12.404 r_scangle_it 7.545 r_scbond_it 5.12 r_mcangle_it 2.447 r_angle_refined_deg 1.87 r_mcbond_it 0.512 r_chiral_restr 0.191 r_nbd_refined 0.185 r_symmetry_hbond_refined 0.17 r_symmetry_vdw_refined 0.163
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_1_deg 12.404 r_scangle_it 7.545 r_scbond_it 5.12 r_mcangle_it 2.447 r_angle_refined_deg 1.87 r_mcbond_it 0.512 r_chiral_restr 0.191 r_nbd_refined 0.185 r_symmetry_hbond_refined 0.17 r_symmetry_vdw_refined 0.163 r_xyhbond_nbd_refined 0.144 r_gen_planes_refined 0.02 r_metal_ion_refined 0.011 r_bond_refined_d 0.01 r_bond_other_d r_angle_other_deg r_dihedral_angle_2_deg r_dihedral_angle_3_deg r_dihedral_angle_4_deg r_gen_planes_other r_nbd_other r_nbtor_refined r_nbtor_other r_xyhbond_nbd_other r_metal_ion_other r_symmetry_vdw_other r_symmetry_hbond_other r_mcbond_other r_rigid_bond_restr r_sphericity_free r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 16483 Nucleic Acid Atoms Solvent Atoms 291 Heterogen Atoms 179
Software Software Software Name Purpose REFMAC refinement HKL-2000 data reduction SCALEPACK data scaling CNS phasing