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Tsx structure complexed with thymidine
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 soaking the crystal with 10 mM thymidine 4.3 286 PEG550 27-32%, sodium acetate 50 mM, glycerol 10%, pH 4.3, soaking the crystal with 10 mM thymidine, temperature 286K
Crystal Properties Matthews coefficient Solvent content 6.2 82
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 149.653 α = 90 b = 149.653 β = 90 c = 119.939 γ = 120
Symmetry Space Group P 32 2 1
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON NSLS BEAMLINE X25 0.9790 NSLS X25
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 3.1 30 97.1 28482 27650
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (All) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (All) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION SAD THROUGHOUT 3.1 29.34 28481 25578 2072 97.1 0.269 0.297 0.269 0.2579 0.297 0.2881 RANDOM 62.29
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -3.52 4.06 -3.52 7.04
RMS Deviations Key Refinement Restraint Deviation x_torsion_deg 26.8 x_angle_deg 1.5 x_torsion_impr_deg 0.81 x_bond_d 0.008
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 4126 Nucleic Acid Atoms Solvent Atoms Heterogen Atoms 68
Software Software Software Name Purpose CNS refinement DENZO data reduction SCALEPACK data scaling SOLVE phasing